KEGG   Ciona intestinalis (yellow sea squirt): 100181156
Entry
100181156         CDS       T01056                                 
Name
(RefSeq) dynactin subunit 5-like
  KO
K10427  dynactin 5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04145  Phagocytosis
cin04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    100181156
  09142 Cell motility
   04814 Motor proteins
    100181156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cin03036]
    100181156
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100181156
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     100181156
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     100181156
SSDB
Motif
Pfam: DCTN5 Hexapep GMPPB_C LbH_EIF2B Hexapep_GlmU Fucose_pyrophosphorylase Hexapep_2
Other DBs
NCBI-GeneID: 100181156
NCBI-ProteinID: XP_002131615
LinkDB
Position
2
AA seq 179 aa
MDLEEIYYDGENYIETATGNKVSRQSVLCGSQNIVLNGKTIVQSDCIIRGDLANVRVGRH
CIIKSRSVIRPPFKKFSKGVAFFPCVIGDHVYIEEDSIVNAAQIGSYVHIGKNCVIGRRC
VLKDCCQIADNTILPPETLVPPFKLYGGSPAVCVEDLPECTQYLMIDATKQYYENFKRK
NT seq 540 nt   +upstreamnt  +downstreamnt
atggatttagaagaaatatattatgacggtgaaaattatattgaaactgccaccggaaac
aaagtaagcaggcaatctgttctgtgtggaagtcaaaatattgttttgaacgggaaaacc
atcgtgcaaagtgattgtattataagaggagacttggcaaatgttcgggttggaagacat
tgcattataaaaagtagatctgttatccgaccaccttttaaaaaattcagcaagggtgtt
gcatttttcccgtgtgttataggtgatcatgtatacattgaagaggatagtattgttaat
gctgcacaaattggatcatatgtacatattggcaagaactgtgtaattgggagacgttgt
gtattgaaagattgttgccagatagctgataacacaattcttccacctgaaactttggtt
cctccatttaaattatatggtggttctcctgctgtttgtgtggaggatttgcctgagtgc
acccaatatttaatgattgatgcgacaaagcagtattacgaaaattttaaaagaaaatga

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