Ciona intestinalis (yellow sea squirt): 100181203
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Entry
100181203 CDS
T01056
Name
(RefSeq) organic cation transporter protein-like
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100181203
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100181203
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100181203
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GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
100181203
NCBI-ProteinID:
XP_002123077
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Position
2:complement(1023473..1028746)
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AA seq
555 aa
AA seq
DB search
MIEFDRILDKIGHLGKYQIILCLLVYWLGVPAGLHNIASVFYAAEVPFRCYVPPLDNTSA
YPSLTEQQLYNYTTPYYDGEYESCYRYGYNTSTCIPPSTSCVNQSYPAIACDAGYFFDTS
EFTSTVNSEWNLVCDRKILGTMATSIYFAGMWTGAVVSGNLADYIGRKNTMLACAVGNLI
SGVATAFTPWFELFVVLRFFSAAFSHGAFLIMFVYVVEITGNKRTISGVHVHTAFSVGYT
LNSLIAYFLRDWRQFYFVLSLTPIPYFIIHFFIPSSPRWHFSNGRDEMGKKVSERFAKGN
GKVITEKDWTNAVVAENDEDVSERTYTSLDLFKSKRMCLITINCMFSWLVISMVYYGLSL
NAGALAGDIFLNNALNGILEIVGYVFVQLTMDRWGRKVLLSFMMIMQGSACIISTVLSEL
ADSNEAMVTAGVVFAFIGKVGVSGSFAIIFNFTAELYPTVIRGNAVGIGSMAARIGSISS
PFIILLQDYVSWLPTSIFGSMSVLAGLFAILLPETMNRTMPQTIAEAELFYAGKYQQKEK
KDGIIENPVTNSTML
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattcgacagaatactggacaagatcggccatcttggaaagtatcaaatcatt
ttatgtttgttggtttattggcttggtgtaccagcaggtctgcataacattgcatcagta
ttttatgctgcggaagttccgttccggtgctatgtacctccactcgataacacatcagct
tatccaagtctaactgaacagcagttgtacaactacacgactccatactacgacggggaa
tacgagtcttgctaccgatatggttacaacacgagcacatgtatcccaccttccacttcg
tgtgttaaccaatcgtacccagctattgcatgtgatgccggttacttttttgacacttct
gagttcacgtcaactgtcaacagcgagtggaacttagtgtgtgatagaaaaatacttgga
acaatggccacgtcgatttattttgctggaatgtggacgggtgcggtcgtgtctggcaac
ctggcagattatatagggagaaaaaacaccatgttggcatgtgctgttggaaacttaata
tctggagtagctactgcgtttactccgtggttcgaacttttcgtcgttcttcgatttttc
tcagctgcgttttctcatggagcattccttattatgtttgtatacgttgttgaaattacg
ggcaataagaggactataagtggggtgcatgtccacacggctttcagtgttggttatact
ctaaactcacttatcgcttactttctacgggattggagacaattttactttgttctttca
cttacaccaattccttatttcatcatccactttttcattccatcgtctccaaggtggcat
ttctccaacggcagagatgagatggggaaaaaagtaagcgaaagatttgcgaaaggaaac
gggaaagtcataaccgagaaggattggacaaatgctgttgttgcagaaaatgacgaagat
gtatccgaacgcacatacacctcgttggacctgtttaaaagtaaaagaatgtgtctaata
accatcaactgcatgtttagctggttggtaatttcaatggtatactatggactttctctt
aatgctggtgcccttgccggagacatatttttaaacaatgctttgaacggaattctggaa
attgttggctatgtctttgtacaattgacaatggatcgatggggacgaaaagtcctgctt
tcatttatgatgattatgcaaggctcagcttgcataattagcactgtactaagcgagctg
gcagacagtaacgaagcaatggttaccgctggggtggtgttcgcttttatcggcaaggtt
ggagtgtctggttctttcgctatcatattcaacttcactgcagagctgtatccaacagtt
ataaggggaaatgcagttggaattggctcaatggccgccaggatcggaagcattagttct
ccttttattattcttcttcaagattatgtatcgtggctaccaacctcaattttcggatca
atgtccgttttagcaggattgttcgcaatcttgcttcccgagacgatgaatcggacgatg
ccgcaaacgatagcagaggctgaattattttacgctggaaaatatcaacaaaaagaaaag
aaagacggtatcatcgaaaacccggtaacaaacagcaccatgctatag
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