Ciona intestinalis (yellow sea squirt): 100181291
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Entry
100181291 CDS
T01056
Name
(RefSeq) mannose-binding protein A-like
KO
K03991
mannose-binding lectin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100181291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100181291
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cin04091
]
100181291
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Opsonins
100181291
Lectins [BR:
cin04091
]
C-Type lectins
Group 3: Collectins
100181291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Clusterin
Motif
Other DBs
NCBI-GeneID:
100181291
NCBI-ProteinID:
XP_026692805
Ensembl:
ENSCING00000014282
LinkDB
All DBs
Position
12:2035941..2037092
Genome browser
AA seq
239 aa
AA seq
DB search
MLFKLLLALLLMFCVEAQDTRQILLTLSSVGNSEKGAQGPPGRPGKRGPPGLRGSAGPVG
VLGPKGQKGECTSNSACVDNTIQEMENRFSRFKNQIETLFQTGVKLINGTVWFSAGNGYL
YRTLPASNYHAANRTCAAIGARLAVVAPRNINITRMIKQHFGVAAPHTWIGLNDIEQENA
WVWENGERLLSSDTNWFTGEPNSFASGEDCVLLYPSGHWNDVSCDRVYTPLCEMSVFDT
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaagttattattagcattgttgcttatgttttgtgttgaggcgcaagatact
cgacagattttgttaactttgagctcggttggaaattctgagaagggggcgcaaggtcca
ccgggtcgtccaggtaaaagaggaccacctggattgagaggctcagctggacctgtcggc
gtactcggtcctaaaggacaaaaaggagaatgtacttcaaacagtgcatgcgtcgataac
actatacaggagatggaaaaccggttcagcaggtttaaaaatcagattgaaactcttttc
caaactggagttaaactgataaatggaacagtttggttttctgccggaaatggttattta
tatcgaactctcccagcatcaaactatcatgctgctaatcgtacgtgtgcagcaatcggt
gcaagattggctgttgttgctccaagaaatataaacataacgagaatgattaaacagcac
ttcggcgttgcagcaccacacacctggatcggccttaatgacattgaacaagagaacgct
tgggtttgggaaaacggggagcgacttttaagcagtgatacaaattggtttactggagaa
ccgaactcgtttgcatctggggaagattgtgtgttattgtatccttcaggacattggaat
gatgtctcatgcgatcgcgtttatacaccactctgcgaaatgtcagtgtttgatacataa
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