Ciona intestinalis (yellow sea squirt): 100181332
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Entry
100181332 CDS
T01056
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100181332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181332
03036 Chromosome and associated proteins [BR:
cin03036
]
100181332
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100181332
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100181332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
100181332
NCBI-ProteinID:
XP_002123435
Ensembl:
ENSCING00000005394
LinkDB
All DBs
Position
8:complement(3031703..3064683)
Genome browser
AA seq
923 aa
AA seq
DB search
MDFGEGSYLDPSARNTRFSNMSGIVHSPATAKDGRSRVRKTGEIMKSMKLLDDAIANDSI
MSGITMTPKNFDFDSTVNTNKTSRFNISRFRKSTKMSEDSMFMEPNEMGMTAMLDESAFL
FDPETPHRFKSKEQDAVSVESASMSLFTDFKTFLTRYGSSVDLFQLVDSYMEVCEDNESL
VRSLAGKLRKGPGFEMADGMHKLMKQEKQTWRLISALYKDRQASATYDDGMNIDDLANNI
SERKAVEKLFEVNSDVRQAQIVIDWLEQNAADEIEGEADRLRNYASAVSWENTLHRLNRN
KEQGIEDPNLIYEMDPDAPTRLKREIDDLDREDEKQLLKIIFSFIRAGKIEEAEDLCVTH
GQPWRAATLEGWRLHNDPNMNNDASEDMGLVPIEGNPHRDLWKLACWTLSSDETNNAHER
AIYGALCGNMDAMLSVSSSWDDHLWAHYKTMVDMATERHIQQTANIMKPWQCVVKRVPLP
DGYWKQNIDLGDCDLVFNKIENSNDQIVREESDNPYHFIQRCIILNDMEAMMDKCLEWLD
DASMQLLRFLVHIILFLRTLGVHLQTEHCDKTIEAYVRKLIADGRTNHLVATYTAALPSE
LQIINYSAFLEAITDSNLQKEYLELALEAGLEIPAITKRVVESIRSIGGVNQTVAPDSSI
ELPVTIDDQRKIDSIEWLVFDPSQRCEALKQCNAVMRQFLASRKHEAAHDVFVKIPSDSI
DILYNEWHAQADKDVPLPADADNAIREHLCMKAYLGAHTSFKEWFKHLHTSKPQEYQPTI
HQTSTFGSVSIPELVAEEHRQKVSADKISAWDDKLRSLCDLVCDKIYNVLLFPQGWLMDM
RDDGDSEEGEWRNHQMGLLRRVCIPYLSNLLLTVLVDTGGRYKECGQLANVLASEEYKLY
ELFTKQEGKEIMKRIQKALIKTL
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggggaaggatcgtatttggatccttcagcaaggaacacaagatttagtaac
atgagtggcatcgtacattcacctgccacagcaaaagatggaagatcaagggtgcgaaaa
actggagaaatcatgaaatcaatgaaattattagatgatgcaattgccaatgattcaatt
atgtcaggaattactatgactcctaaaaactttgattttgactctacggtcaacaccaac
aagacttcacgttttaacattagtcgattcagaaaatcaacaaaaatgtccgaggatagc
atgtttatggagcctaatgagatgggcatgacggccatgttagatgaatcagctttcctg
tttgatcctgagactcctcatagatttaaaagcaaagaacaagatgctgtgtctgttgaa
tcagcaagcatgagcttattcaccgatttcaaaactttccttactcgatatggttcatcg
gtcgacttgttccagttggttgattcctacatggaggtgtgtgaagataacgagagtctg
gttcgaagtcttgcgggtaaactgagaaagggacccggatttgaaatggctgatggaatg
cataagttgatgaaacaggagaaacaaacatggagacttatctctgctctttataaagat
agacaagcatcagccacatatgatgatggtatgaacattgatgatttggcaaataacatc
agtgagcgaaaagctgttgaaaaactatttgaagttaattctgatgttagacaagcccag
attgtaatagattggttggaacaaaatgctgccgatgaaatagaaggggaagctgatagg
ttgaggaattacgcgagtgctgttagctgggaaaacactctacaccgactgaatagaaat
aaagaacaaggaattgaagatcctaacttaatatatgagatggaccctgatgctcctaca
aggttaaagagggagattgatgatttggatcgtgaggatgaaaaacaacttcttaagatc
atcttctcatttatcagagcagggaaaatagaagaggctgaagatttatgtgttacacac
ggccagccatggagagcggcaacactggaaggatggaggttgcataatgatccaaatatg
aataatgatgcatcagaagacatgggattggttccaattgagggaaatccccaccgagat
ttgtggaaattagcatgttggacgttatcaagcgatgaaacaaacaacgctcatgaaaga
gccatatatggtgcgctgtgtggaaacatggatgctatgttgtccgtaagcagttcatgg
gacgatcacttgtgggcacactacaaaaccatggttgacatggcaaccgagcgtcatata
cagcaaaccgcgaacataatgaagccatggcaatgtgtggtgaaacgagtccccctccct
gatggatactggaaacaaaatatagatcttggagattgcgacctcgtgttcaacaagatt
gaaaactcaaatgatcaaattgtgagggaagaatccgacaacccgtatcactttatacag
cgttgtatcatacttaatgatatggaagctatgatggataaatgcttggagtggttggat
gacgcctcgatgcaattacttcgattccttgttcatattattctgtttctacgaacattg
ggtgtccatcttcagacagagcattgtgacaaaacgattgaagcttacgttcgtaaactc
atcgctgatggtcgtaccaaccacttggtggcgacatacacagcagctctgccatcggaa
cttcaaatcatcaattattctgctttccttgaggcaattactgattccaatctacagaag
gaatatttagagctggcattggaagcaggactcgaaattcctgcgattacaaagcgagtc
gtagaaagtattcgatctatcggaggcgtcaaccaaaccgtggctcctgattcatcgatt
gaacttccggttaccattgacgaccagcgtaagatcgattccatcgagtggttggtgttt
gacccctcgcagcgatgtgaagcgctcaagcaatgtaacgctgtaatgcgacaattctta
gcatcacgaaaacatgaagcagctcatgatgtgttcgtgaaaattccatccgattccata
gacatcttatataacgaatggcatgcgcaagcagataaagatgttcctttgccagctgat
gctgataatgcaatacgtgaacatctgtgtatgaaggcataccttggtgctcatacttca
ttcaaggaatggttcaaacatctacacaccagtaaaccacaagaataccaaccaaccatc
caccaaacatctacttttggttcggttagcatccccgaacttgtagctgaagaacacaga
caaaaagtatctgctgacaaaatatcggcatgggacgataaattaagatctctatgtgac
cttgtgtgcgataaaatatacaacgtattgttgtttccacagggatggcttatggatatg
agggatgatggcgacagcgaggaaggtgaatggcgcaaccaccagatggggttgttgaga
agggtttgcattccttatctatcaaacctcctgcttactgtgcttgttgataccgggggt
cgatataaagaatgtgggcaacttgcgaatgtgttagcgtcagaggaatataaactatac
gagttgtttacaaaacaagaaggaaaagaaatcatgaaaagaatccaaaaagctctgatt
aaaacattatga
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