Ciona intestinalis (yellow sea squirt): 100181362 Help Entry 100181362         CDS       T01056                                  Name (RefSeq) endoribonuclease Dicer   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism cin  Ciona intestinalis (yellow sea squirt) Brite KEGG Orthology (KO) [BR:cin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:cin03036]     100181362 Chromosome and associated proteins [BR:cin03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     100181362    microRNA pathway     RISC loading complex      100181362 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Dicer_dsRBD Ribonuclease_3 Dicer_platform Ribonucleas_3_3 Dicer_dimer PAZ Dicer_PBD Helicase_C dsrm DSRM_2 ResIII Motif Other DBs NCBI-GeneID:  100181362 NCBI-ProteinID:  XP_009860329 LinkDB All DBs Position 11:complement(3468966..3483842) Genome browser AA seq 2059 aa AA seqDB search MLSSGSSQEPGKPSWTSNSQCNSFIPRPYQIELLECAAKQNTIICLNGDFGKCFMYTMFL REVIIKHNGKLNNAPKFAVLLLKEDCMVNEQSELLRSHLDVDIISCTHNMTDSFTDESLQ QLCHDHQVLVCTPEVFVKLLSISLYIAQYMDLVIFDDCHLVNIEMHPIRKIMKILDENRY TPMILGLTSSLLNNNITADELNKCIHSMETVMHCKAQTATDLIAVDRHNINPPVENIILS SDENKDGLNSQLLSDIRKILNGALEWLNSCQIVSTTRTKTTEWQLASTENEEEKILTNYN SNTSVIPKTSLDVGILEEEDGTQRLCSVKSPPLSECHEGSKKIVMDKKEKQEEDLDVCTV AIQLINESLMVADVLGPWCVYQLIVVVLKQLQKNLHLINVHLNTEAQNTENGEVTSGKWM WQAVMLQYVQTKFKMVYSICHWYMGDQKAVNLAFVAPKVHRLIQVLKEYKPVVEGEEKQN TSFKYNNRNESDYVSWWQDSDAEDEDADMMEGKKEEKEDENHPSLFINTLCGIVFVEERY VAMMLQRLLRELSKEDKNLKHVSSSHLTPGVEGERRGVDPASMDQSKQEEVLRKFRSHES NLLICTGDLEDCAYMPKCNLIMRFDVPKSYRSYAESKSRARAQTSAYVMLVRETEKSHFM EKLQEYKKIEKVLLGPDWSLNEVYDNNEDDDIEEMIPPYILNRNTQVNMKNAVRIVNRYC NRLPSDPFTHLSPRCEVVEVLNDGDSPMFMCILQLPINSHVREPVQGIVMPTLQLAQQAV AMETCKVLYEAGELDENLMPIGKETVKYAEELDPWKREVSSITGRPGSTKKRQTYNKDSP QILRSCLPQPDINLFIYEIEMKIKNPLLDELNVRRRKLFFPEETSRCFGILTTKPIPQIP GFPIFTRSGEESAKLKFCRGFVQLSAQQIKLVRIFHRYVFSDMLRVDRVPLSFQPEKSTS QLLVVVLNKVGTNKSSTANSSQLNIDWSFMMKTESKRRVIEKMKSDPWYKHKMNEQNKVF VFNRQLYEDGVVVAKYRSCDQPNRFYVAELKDDMTPLSSFPSSEYESFLHYYQLKYGLDI RCLKQPLLDVDHTSSRLNLLTPRHLNQKGKALPMSSLEKKRAKYESLHNRQILVPELCEV HPIPASLWRKAVCLPSVLYRVNQLLIAEELRKNIAFKSGITMEQPPIGNMWQNLHFGWTD NEDSDDDNEKLLEKSPAQRKSQVDEISSENNEVLNENKNVFDENIPKVPNSVENDGECAQ HDNLEETNHKQNQHVDFENSTAKSDVYKTTVINHMKENHDEDDYVHVHGSNDVNVHKKNI NHDNDSDRIGDTVHHGADDENVHDEKNDVHYHEVNDNHLCDDDIHDSDDYIHNENKDDHC HDNIHNDDDDDDDRFSFSSHDYEAHFDLSDHEDENMKNNVNDSLASIRGCKKKIKDVENP IWISSDVIDDYNKENPVKNLGPGPGLILQALTLSNASDGFNLERLEMLGDSFLKHAVTVY LYCTYPESHEGKLSYMRSKKVSNYNLYRIGKQFGLAGKMTGLIFDPTVNWLPTGFVVGAS GQGQDSDEDISDDDVEIGVWTGIPSKKKVVKKTTTSNAVDPPPSLPPSTINDEEEIYEED EIRMIDGMLGGCIRTLGGSPKGDNGLFGLDIGHALSSHQSMHFTDKAALRRSQLNKQNLE DFVIDTWTPVDASGKPLNNSDPLMLDLHTQHSLADKSIADCVEALLGAYLTTCGHRSAQL LLCHLGLNVLPKVAQAETSKTVDRFGYLTPPTNKMLECRPNQQNKLDQLLVALSGFERKI NYTFKNKAYLLQAFTHASYYYNTVTDCYQRLEFLGDAVLDFLITRHLFNDERHHSPGALT DLRSALVNNTIFASLAVHYDFHKYFKSISPELHHIIEDFVMYQQKQEDAQGMDAHLMRDY DRVEIVAPSSLEKDEEEGENEDVEVPKALGDIFESVAGAIYMDSGMDLSSVWKVYSVMML PLIEKFSACVPRSPVRELLEMEPETAKFSCAEKRYDGKVRVTVEIIGKGRFKGVGRSYRI AKSAAARRALRYLKGPFIY NT seq 6180 nt NT seq  +upstreamnt  +downstreamnt atgttgtcttctggtagctcccaagaacctgggaaaccttcctggacaagcaattctcaa tgtaattcgtttattccacggccataccagattgaattgctagaatgtgcggccaagcaa aacaccattatttgcttgaatggagactttggaaagtgtttcatgtacaccatgttttta agggaggtcatcataaaacataatgggaaattaaacaatgctccgaaatttgctgtcctg cttttaaaagaagattgtatggtgaatgagcagtcagaacttttacgaagtcatttagac gttgatataatatcatgtacgcacaatatgaccgattcttttactgatgaatctttacaa caactctgccatgaccaccaagtgttagtttgcactccagaagtctttgtaaagttgctc agcattagcctatacatagctcagtacatggacttagttatatttgatgattgccatttg gtgaacattgaaatgcacccgatacggaaaataatgaagatattagatgaaaataggtac acacccatgatacttggtttaacgtcatcgcttctaaataacaacattactgcagatgaa ttaaacaaatgcattcatagcatggaaactgtaatgcactgcaaggcccaaactgcaaca gatctaatcgctgtagatcgccacaatataaatccacctgttgaaaacattatattaagc tcagatgaaaacaaagatggtttaaattctcagctactttctgacattaggaaaatatta aatggagcattggaatggctaaattcttgtcagatagtctccacaacaagaacaaaaaca acagaatggcaattagcatctacagaaaacgaagaggaaaaaattttgactaattacaac tcgaacacaagtgttattccaaaaacgtccttggatgttggaatattggaggaagaggat ggaactcaaagattatgttcggtaaaaagtcctcctttatcggagtgccatgaaggatcc aaaaaaattgtaatggataagaaagaaaagcaagaagaagatttggatgtttgtacagtt gcaatacaacttataaatgaaagtttgatggtagctgatgtactaggaccttggtgtgtg tatcaattgattgtagtcgttttaaagcagttgcaaaaaaatttgcatttgatcaacgtt catctaaatactgaagctcaaaacacagaaaatggtgaagtgacatctggaaagtggatg tggcaagctgtgatgttgcaatatgtgcaaactaaattcaagatggtgtacagcatatgt cactggtacatgggagatcagaaagctgtcaatttagcttttgttgcacccaaagtacat cgcttaattcaagtattgaaggaatacaaaccagtggttgagggagaagaaaaacaaaat acttcgttcaaatataataaccgaaatgagtcggattatgtgtcatggtggcaagactct gacgcagaagacgaagatgccgatatgatggagggaaagaaggaagagaaagaagatgag aatcatccgtctctcttcatcaatactttgtgtgggattgtctttgtagaagaaagatat gtcgcaatgatgttacaacgattgctgcgggaactttcaaaggaagacaagaatttaaaa cacgtttcttcctcccatcttactcctggagtggagggtgagagaagaggagttgatcct gcatccatggatcagagcaaacaggaagaggtcctccggaagtttaggagccatgagagc aacctgctcatctgtacaggagatttggaggattgcgcttacatgccaaagtgcaacctc atcatgcgcttcgatgttccgaaaagttatcgaagttacgctgaatcaaaaagccgagcc agagcccaaacatcagcctatgttatgttggttagagaaacggaaaaatcacattttatg gaaaaacttcaggaatacaagaaaattgaaaaggtgttactgggtccagactggtcctta aacgaggtgtatgataataatgaggatgatgacattgaagagatgatccctccttatata cttaataggaatacacaagttaatatgaagaatgctgtgcgaattgttaataggtattgc aaccgcttgccaagcgacccgtttactcacctcagtcccaggtgtgaggtggtagaggtt ctcaatgatggggattcacccatgttcatgtgcattctgcagttgccaatcaactcccat gttagagaacctgtgcagggaattgtcatgccaactctccaacttgcccaacaagcagta gccatggaaacatgcaaggttctttatgaagctggagaattagatgaaaacttgatgccc attggcaaagagacggtaaaatatgccgaggaattagatccatggaaacgtgaagttagt tccatcactgggagacctggatcaactaaaaaacgacaaacttataataaagattctcct cagatcctgaggtcctgtcttccacaacctgatatcaatctcttcatctacgagattgag atgaagatcaaaaatcctcttcttgacgaacttaacgttagaagaagaaaactttttttc ccagaagaaacttctcgttgttttgggatcctgacaacaaaaccaatacctcaaattcct gggtttccaatcttcacaaggtcaggggaagaaagtgccaagttgaaattttgtcgaggg tttgtccaactttctgctcaacaaatcaaacttgttcgaatatttcatcgttatgttttc tctgacatgttgagagtagatcgagttcctttatctttccaacctgagaaatctacaagc cagttgctggtagttgtgctgaacaaggtgggaacaaataagtcttcaacagcaaacagc agccaactcaacatagactggagttttatgatgaagactgaaagtaaacgtcgagttatt gaaaaaatgaaatctgatccgtggtataaacataaaatgaacgaacaaaataaagttttt gtttttaatcgacaactatacgaagatggggtggtagtggccaagtacagaagctgtgat cagcctaacaggttttacgttgccgagttaaaagatgacatgacacctttgagtagtttc ccatcttcagaatacgagagtttcctacattattatcaacttaaatatgggcttgacatt cgttgtcttaaacaacctttacttgatgtggaccatacttcatcaaggttaaaccttctg acccctcgacatttaaaccagaaaggaaaagctctgcccatgtcctcacttgagaaaaag cgagcaaagtacgaaagtttgcacaacagacagattttagtcccagagttatgtgaagta catcctatacctgcttcactgtggaggaaagctgtttgtctgccttctgttctgtacaga gtgaaccaacttctaatagctgaggaacttcgtaaaaatattgctttcaaatctggaatt acaatggaacaaccacctataggtaacatgtggcagaatcttcactttggttggacagac aatgaagacagcgacgacgacaatgaaaaattgttagaaaaaagtccagctcaacggaaa tctcaggttgacgaaatttcaagtgaaaacaatgaagttttgaatgaaaataaaaacgtt tttgatgaaaatattccaaaagttccaaattctgtagaaaatgatggagaatgcgcacaa catgacaacttagaagaaaccaatcataaacaaaatcaacatgttgattttgagaattca actgccaaaagtgatgtttataaaaccactgtgataaatcatatgaaggagaatcatgat gaagatgattatgttcatgttcatggaagtaacgatgttaatgttcataaaaagaatatc aatcatgataatgattctgatcgtattggtgatactgttcatcatggtgctgatgatgaa aatgttcatgatgaaaagaatgatgttcactatcatgaagttaatgataatcacctttgt gatgatgatattcacgatagtgatgattacattcacaatgaaaataaagatgatcattgc catgataatattcacaatgatgatgatgatgatgatgaccggttttctttctcatctcat gattacgaagcccattttgacttatctgatcacgaagatgaaaacatgaaaaacaatgtg aacgattctctcgcatcaattagaggttgtaaaaagaagataaaagatgttgaaaaccca atctggatatcttctgatgtaattgacgattataataaagagaatccggtcaagaacctt gggccgggacctggacttattttgcaggctcttactttatcaaacgctagcgatggtttt aatttggaaagacttgaaatgttgggagattcttttctcaaacatgctgttactgtgtat ttgtattgcacttatccagagtcccatgaaggcaagctttcttacatgagaagcaaaaag gtttccaattacaacttatatagaatcggcaaacagtttgggcttgctgggaaaatgacg ggacttatatttgacccaacagtaaactggttaccaactggttttgtggttggtgcatcg ggccaggggcaagattcggacgaagatatttctgatgatgatgtcgaaataggtgtttgg actggaattccaagcaaaaagaaagtggtgaaaaaaacaacaacttctaacgcagttgat ccccctccctcacttccaccatccacgatcaatgatgaggaggagatttacgaggaagat gagatccggatgatagatgggatgttggggggttgcatccggactttgggagggtcaccc aagggagacaacggacttttcggattagatattggacacgcattatcaagtcatcaatcc atgcatttcaccgataaagctgcgcttagaagaagccaacttaataaacaaaatttggaa gattttgtgatagatacatggacacctgtggatgcgtcaggaaagccactaaacaacagc gaccctctaatgcttgaccttcacactcaacattcgttggccgataaatcaatcgcagat tgtgttgaagcattactcggcgcttatttaacgacgtgtggtcatcgttctgcccaactt ctgctgtgtcacctcggtttaaatgttcttcctaaagtagcacaagcagagacgagcaaa acagttgacagatttggatacctcacgcccccaactaataaaatgttagaatgtcggcca aaccagcaaaataaacttgaccagttgcttgtggctctgagtggttttgaaagaaagata aattacacgttcaagaataaagcttacctacttcaagcattcactcatgcctcgtattac tacaacactgtaacggattgctaccaacgtcttgaatttttgggcgacgcagttcttgat ttcctgatcacgcgtcatctttttaacgacgagcgacatcattcaccgggtgctcttaca gatctgagatccgctctcgtcaataacacaatctttgcctcacttgccgtacattatgat ttccataaatatttcaagtccatctcaccagagcttcaccacatcattgaagacttcgtg atgtatcagcaaaagcaggaagatgctcaaggaatggatgctcacctgatgcgggattat gatcgtgttgagatcgttgctccatcatcactggagaaagatgaagaagaaggagagaat gaagacgtggaggtccccaaagcccttggagatatatttgaatcggtagcaggtgcaata tacatggacagtggaatggacttaagttctgtatggaaagtttattctgttatgatgtta cctcttattgaaaagttcagcgcatgtgttccaagatcaccagttcgagagttattagaa atggaaccagaaaccgcaaaattcagttgtgccgagaaacgttatgatgggaaggtcagg gtgactgtggaaattattggtaaaggtcgtttcaagggggtgggtagaagttatcgaatt gctaaatccgctgcagccagaagagctttaagatatttaaaaggaccattcatttattaa

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