Ciona intestinalis (yellow sea squirt): 100181370
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Entry
100181370 CDS
T01056
Name
(RefSeq) RAD50-interacting protein 1-like
KO
K20474
RAD50-interacting protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100181370
Membrane trafficking [BR:
cin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
100181370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RINT1_TIP1
Motif
Other DBs
NCBI-GeneID:
100181370
NCBI-ProteinID:
XP_009858853
Ensembl:
ENSCING00000022959
UniProt:
A0A1W3JI05
LinkDB
All DBs
Position
6:1902899..1913329
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AA seq
684 aa
AA seq
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MASLYGDEINQYLDATFGSDVKSLKNIENIFKEAKRKSEALKLQLTKAKEERTEKIESAI
SASVDALEHAKALDGATESIMTEVLSRLDDSETAVEKFRAVKAKIDEVERYVSYFKWIEK
IDEASGGVQQSILSDSMQDACATFRTLVNHYTCFTGNQTKCKHLVNYLKDTIMFWYKILK
DKLSKDLDGILKQINYPFINSPGPNTLQKAPNNPEKSIPSPYTNLDPAIHLTEVIKNLLV
LNLPPELGRSSEASTSHAEKQEDLLLPFQLLLRPLKRRFIFHFTGTKPTNVIHKPEWYLT
QILNWLENHAGFLEHTIQPILDDNGLAHRDAVVMFAQGLLQLVWAKLSVDIEEIIYTDEL
YSHVVDEVLLFDRELRAVHDIPTAVLNTSSPLTVLTQTHCIQKWLNIERTCAAERLDTLL
ASDEAWTSKFSEITEDIDEQRTPQCAETFVIMLQTMTDRHLLPFILQARISSTDSTVFDA
TIHLFGRICTEGVESHTQLLLNEFREKCKPYMYDGWLALPTAEEQLVFVVSQSACGMLAV
LQDRLHFLEQRLCRELFTQLWRVIAENVDIYLFNEVIVKNHFNSGGAAQIHYDMTRNLFP
MFGHYTSKPDNYFKRVKEGCILLTLQSGSALLLREVLEESLKPPDPMDPHPTPVKPTSAL
NDIGVFLLSAKQALDIIKRRVEWT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttatatggagatgaaatcaaccaatatctggacgcaacttttggatcagac
gtaaaaagtttgaaaaatattgaaaatatttttaaagaggcaaagcggaaaagtgaagcc
ttgaaactgcagttaacaaaagctaaagaagaaagaacagaaaaaattgaatccgctatc
tctgcatcagttgacgcccttgagcatgctaaagcacttgatggcgctacagagagtatt
atgacggaagtattgtcacgcttggatgattcggaaacggcagtggaaaagttccgagcg
gtgaaagctaaaatcgatgaagtggaacgatacgtgtcgtattttaaatggatcgaaaaa
attgatgaagcgagtggaggtgtacaacagtcaatactaagcgacagcatgcaagatgca
tgtgctacattcagaacattagtcaaccattatacatgcttcactggtaaccaaactaaa
tgcaaacacctggtcaactacttgaaagataccatcatgttctggtacaaaatactgaag
gataaactgtcaaaagatttagatggcattctgaagcagataaattacccgttcatcaac
agccctggtccaaacacacttcaaaaggctccaaacaacccagaaaagtcaatcccaagt
ccatacaccaacctagaccctgcaatacacttaactgaagttataaagaacctgttggtt
ctaaatttgcctccagagttaggaaggagcagtgaagccagtacatcacatgcagaaaaa
caagaagatctactactcccatttcaacttttacttcgacccctcaagcgaagattcatc
ttccacttcacgggaaccaaaccaacgaacgtcattcataaacctgagtggtatttaacg
cagatattaaactggttggagaaccatgccgggttcttagagcatacgattcaaccaata
cttgatgataatggacttgcacatagagatgctgtggttatgttcgcacaaggtctctta
caacttgtgtgggccaagttatcagtggatatcgaagagattatctacaccgatgaactg
tattctcatgtagtggatgaggttttattatttgaccgtgaattacgagcagtgcatgac
atacccactgctgtattgaacacctcaagtccacttaccgtacttacacagacgcattgt
atacagaagtggctcaacattgaaagaacatgtgctgctgaaagacttgacactttactt
gcatctgatgaagcgtggacatctaagtttagtgaaataaccgaagatattgatgaacaa
agaacccctcagtgcgcggaaacatttgttattatgttacaaacaatgaccgatcggcat
ttattacccttcatactacaggctcgtattagctcaacggatagcactgtatttgatgcc
acaatccatttgtttggccgtatttgcactgaaggtgtggaaagccatacacaacttttg
ttaaatgagtttcgcgaaaaatgtaaaccttatatgtatgatggttggctagccttgccc
acagcagaagaacaattggtgtttgtagtgtcacaatctgcatgcggtatgctagctgta
ttacaagatagactgcattttcttgaacagagattatgtagagagctattcactcagcta
tggagagttattgctgaaaatgtggatatttatttgtttaacgaggtaatagtaaagaac
cactttaacagtgggggagctgcacaaatacattacgatatgactcgtaacttgttcccg
atgtttggccattataccagcaagcctgacaactattttaaaagagtaaaagaggggtgt
atactcctaaccctacaaagcggcagcgccttgttgttacgagaggttttagaagaatcc
ctgaaacccccagaccctatggacccacaccctaccccagttaaaccaacttctgcgcta
aatgacatcggggtgttccttctttcagcaaagcaagcactggatattataaagagaagg
gtggagtggacatag
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