Ciona intestinalis (yellow sea squirt): 100181376
Help
Entry
100181376 CDS
T01056
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00510
N-Glycan biosynthesis
cin00513
Various types of N-glycan biosynthesis
cin01100
Metabolic pathways
cin04141
Protein processing in endoplasmic reticulum
Module
cin_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
100181376
00513 Various types of N-glycan biosynthesis
100181376
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100181376
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
CARDB
DUF8742
Cohesin
Motif
Other DBs
NCBI-GeneID:
100181376
NCBI-ProteinID:
XP_009859305
LinkDB
All DBs
Position
8:complement(2908575..2914066)
Genome browser
AA seq
593 aa
AA seq
DB search
MISNSYIGIFLLSLAAIASATLVNEEVSRVIDLKSHLVKVTTTVTLKNSGNSAVSNFQFT
VDPAHVKQLAYISISKGSDDDTSFKMTEKSGAKGTFTVALPEPLKSKGTFTFTADEVFAN
ALSPFPKEITQSQNQLVVYRGNHFYFSPYLSESQTTSVELPSSTIETFSKFGNPSHEDTT
IKYGDTKEFENVPANSQNAMKIHYENNTPFLTVTKLERVIEISHWGNIAVEETLDIRHTG
AKLKGSFSRYDYQRQPNSGVSSVKSFKTILPASAMDVYYRDEIGNISTSNLYQADESVDL
ELRPRFPLFGGWKTHYYIGYNLPSYNYLFTRGDVNALKMRFVDHVMDEQVVEDFELKIIL
PEGSKNIKADLPYSAERGEDSLHFTYLDTVGRPVVVFRKKDLVEQHIDDFVVSYSFNRLL
LLQEPLLIVGAFFILFFTVIIIVRLDFSIAHDKVLEARMRVQGVIEQVQSHQAKRQSCYE
AYQAAVTKYKASKDHAAFAYSRKSIEKDHKEATNAINQLSLKLREDAAEAADKVQQMNQT
DALLKDKFANSILLAEKLVQSKMSREQYLENDGKNQKTIDDNIAKIESLVYSL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaaactcttacattgggatttttcttttgtcacttgctgcaattgcttcagcg
actttagtcaatgaagaagttagcagagtgattgatctgaaatctcacttggtgaaagtt
acaacaacagtaacgctcaaaaactccggaaattctgctgtttcaaacttccagttcaca
gtggatccagcccatgttaaacagttggcatacatctcaatttctaaaggcagtgatgac
gataccagttttaaaatgacagaaaaaagtggagctaaaggaactttcaccgtcgctcta
cctgagccattaaagtccaaaggaacttttacatttactgctgatgaagtctttgcaaat
gctttgagcccatttcccaaggaaatcacccaatcccagaaccagctagtcgtttatcgc
ggcaatcatttctatttctctccgtacttgagcgaaagccaaacaactagtgttgaactt
ccttcaagcacaatcgaaactttttccaagtttggaaatccttcacatgaagatacaact
atcaagtatggagataccaaagaatttgaaaatgttccagctaacagtcagaatgcaatg
aaaatccactatgaaaacaacactccattcctcactgttaccaaacttgaaagggtcatt
gaaatttcccactggggcaacatagctgttgaggaaacacttgacattagacacactggt
gcaaaattgaagggatcgttcagtagatatgactaccaacgtcaacccaacagtggggtt
tcatcagtcaaatcattcaagacaattcttccagcttcagctatggatgtatattacaga
gatgaaatcggaaatatttcaacttcaaacttataccaagctgatgaatcggtggatttg
gagctccgaccacgattcccattgtttggtggatggaagacgcattattacatcgggtat
aacttgccaagctacaactatctatttacaagaggtgatgtgaatgcattgaagatgagg
ttcgtggatcatgtgatggatgaacaagttgttgaggattttgaactcaagattattctt
cctgaaggttcaaagaacatcaaagcagacctcccgtactctgccgagcgaggtgaggac
tcgcttcacttcacgtacctcgacacggttggacgaccagtcgttgttttccgcaagaaa
gatttggttgaacaacacattgatgactttgttgtgtcttattctttcaaccgtctcctc
ctgctccaagaacctctcctcatcgtcggagcattcttcatcctcttcttcacagtgatc
atcatcgtgcggctcgacttctccatcgctcacgataaagtccttgaagctcggatgcga
gtgcaaggagtcatcgaacaggttcagtcccaccaagcaaagcgacaatcatgttatgaa
gcataccaagctgctgtgaccaaatataaggcatcaaaggaccacgcagcttttgcctac
tctcgtaagtccattgaaaaagaccacaaggaggcgacaaacgcaattaaccaactttca
ttgaaacttcgggaagatgctgcagaagctgctgataaagttcaacaaatgaaccagacc
gacgccctacttaaagacaagttcgctaattccatcttacttgctgagaagctcgtccaa
agcaaaatgagtcgtgaacaatatcttgaaaatgatggaaagaaccagaaaaccattgat
gataatattgccaagattgaaagtctggtttattctctttaa
DBGET
integrated database retrieval system
