Ciona intestinalis (yellow sea squirt): 100181382
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Entry
100181382 CDS
T01056
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2-like
KO
K11096
small nuclear ribonucleoprotein D2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100181382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100181382
03032 DNA replication proteins [BR:
cin03032
]
100181382
Spliceosome [BR:
cin03041
]
Complex A
U1 snRNP components
Sm proteins
100181382
U2 snRNP components
100181382
Complex B
U1 snRNP components
100181382
U4/U6.U5 tri-snRNP components
100181382
Complex C
U2 snRNP components
100181382
DNA replication proteins [BR:
cin03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
100181382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GIT1_C
Motif
Other DBs
NCBI-GeneID:
100181382
NCBI-ProteinID:
XP_002127683
Ensembl:
ENSCING00000020031
LinkDB
All DBs
Position
11:complement(4890134..4891011)
Genome browser
AA seq
119 aa
AA seq
DB search
MASAGKPKSELTAEELEALEKEEFQTGPLSVLTDSVKNNTQVLINCRNNRKLLARVKAFD
RHCNMVLENVKEMWTETPKSGKGKKKQQPVNRDRFISKMFLRGDSVIIVLKNPLASAEK
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgctggaaaaccgaagagtgagttgacagcagaggaattagaagctttggaa
aaagaagaatttcaaactggacctttgtctgttctcactgattctgtgaagaacaacaca
caagtcttgatcaactgtagaaacaataggaaactcctcgcccgcgtaaaagcgtttgat
cgtcactgcaacatggtgttggagaatgtgaaagaaatgtggacggagacgccaaagtcc
gggaaaggaaaaaagaagcaacaaccagtgaaccgtgaccggtttatcagcaaaatgttt
cttcgaggagactccgtgattatcgtactcaagaatccgcttgcctcggctgaaaaataa
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integrated database retrieval system
