Ciona intestinalis (yellow sea squirt): 100181392
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Entry
100181392 CDS
T01056
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 5 isoform X1
KO
K04308
leucine-rich repeat-containing G protein-coupled receptor 5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100181392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cin04030
]
100181392
G protein-coupled receptors [BR:
cin04030
]
Rhodopsin family
Others
R-spondin
100181392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
7tm_1
LRR_9
7TM_GPCR_Srv
LRRNT
LRR_EndoS
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
100181392
NCBI-ProteinID:
XP_002123281
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Position
11:complement(3230725..3260279)
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AA seq
1192 aa
AA seq
DB search
MSVLNLLVLCWVVGSSPWVSSRTSGTAGVAMADSQPPQTRKSPPCPQACRCSRNTGFGYS
VDCSSLDLNQVPSSVDELTTFLDLSVNNISVVASKAFSNLHLLQELRLVSDNIETLVPGA
FDSLRALETLMLHNNRITNIPGRSFIDTPNLLDLNLDGNFISELHEDSLEGLQNLESLRL
DDNRLSRVPTEALSKTPNLKALDLALNNIKVIHTGAFRHLTKLRMLNLRENKISRIEDGA
FDGPVKCRILHLEHNQLTEYPRPVTGLTKLRELKLNDNKIQRLPDRAFSKQTNLEILMFH
NNPLKSVGRWTFTNLRNLELLEIVGVEEQEHFPDLSGCNKLRELFVVGGRFTQIPDTLCG
KKSVLQRLIVANNRLQNLGGISNCKMLDGLDISGNALKSLNENEMSNLTFLRTLDLSENK
ISSLAENVFGHSKLVKLNLAYNSFAYLPIRGLSQLRKLNVSGVKNMLYLPPIQFMNHLSQ
LEAAYPYHCCQVSNEWVRAHEYEWVGPDDEIIKQSSPAISCHPEPSALTPCDNLLPSVVV
RVVLWLVLVFSSALNMTVVLSSIIRKCRNACRQAHRRQKTPEPVTTTSVTPEQHVMDKFV
QSYDSTGSVSDTFELALCHLAFADFVAGVYIAILVAYDVTTRGNFAEHGAWWQQSLMCRT
AGFFLVMGLQLSFFTVLIATVERYLATMFPLKPEKHISKAVLGLTLSAAWVISIATAIVT
LVSGEEGFPLQERSRRVLPLYNGATCLPWSTHFKYVAVLVGGHVIACLGIVILCVLMYCA
RRKQSWLSAQKHTRRQISLTVACNVTLILPLALIGLLASAVTTYPSAAEPWVFSSESAYS
NQEPAKLNVDLLLTMVMLLISLRFAINPLLYISFSESFRRDMRAAAGWLCCTIRRNRYHD
YDTDDDIDDGFTEPTEFAFHDPNATRQLEASLPVFRHGKIAPDVIQSSGYETHVFGEEFA
NEPFYNMHSDGDLQRKITARRLETTRLVPVMLHAQAYDEDRLSPQLNHHEAKYSQCNSRD
ENITISQMSPERIAAEDNKLNYASAQVANKTYIAQGARPKYNTRLPPLIWRKYSPEDAAN
VDGKKLSQSCESSTSKDSGIQSEPDFGVAYSSGCSSLARSSASSHETGDSLDNTDTTYAR
GFLQVVGERTLPRNEAAHTVDAAHLKLNIAANDVRLEKVDLCELPKVGETVL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcttaaacctcctagttttgtgctgggtcgtcggatcttcgccgtgggtcagt
agcaggacaagtggtacagcaggtgtcgcgatggccgactcacaacccccgcaaacccgc
aaatccccaccgtgcccacaagcttgcaggtgcagcagaaatactgggttcggttacagc
gttgattgctcgtcactcgatcttaaccaagtgcccagctctgtagacgaactaactaca
tttctagacttgagcgtaaacaatatatcagtggtagcaagcaaagcatttagcaatcta
caccttctgcaagaattacgtcttgtcagtgacaacattgaaactttggtgccaggagca
tttgatagtttgcgggcattagaaactttgatgctgcataacaacagaatcacgaacata
cccggcagaagcttcatagacacaccgaaccttttagatctaaatctcgacggtaatttc
atcagcgaactgcacgaggactcactggaaggtttacaaaatcttgagagtcttcgtttg
gatgacaaccgactgtcacgtgtgcctactgaagcgctcagtaaaaccccgaacctcaaa
gccctagaccttgcgttgaacaacattaaagtgatacacaccggagcgttcagacatctg
accaagttaagaatgctgaatctacgtgaaaataagatctcaagaatagaagacggtgcc
tttgacggtccggtcaaatgtcgcatattacacttggagcacaaccaactgaccgaatat
cctcggcctgtaaccggcctcactaagctacgagagctgaaacttaacgacaacaagatt
caaagactaccagaccgtgcattctcaaaacaaaccaacttagagattttaatgttccac
aacaatccgctcaagtctgttggaagatggaccttcaccaatctacgcaatctggaacta
ctagaaatagtcggtgtcgaagaacaagaacattttcctgatctgtctggttgcaacaaa
ctaagagaactctttgtggtcgggggacgcttcactcaaatacctgacacactgtgcggg
aaaaagtcggtcctgcagcgcctcatagtggccaataatcgcttacaaaacctgggcggt
atcagcaactgtaaaatgttagacggacttgacattagcggcaatgcattgaagtcgttg
aacgaaaatgaaatgagcaatctaacgtttcttcgcacactggatttaagcgaaaacaaa
atctcctctctagctgagaacgtgttcgggcacagcaagctcgttaaactgaacctagcg
tacaactcgtttgcataccttccaatacgtggcctctcacagctgaggaaattaaacgta
tcaggagtaaagaacatgttgtacttgccacctatacagttcatgaaccatctgagccaa
cttgaggctgcctacccttaccattgttgccaggtatcgaatgagtgggtacgtgcgcac
gagtacgaatgggttggcccggacgatgaaatcataaaacagagttcaccggcaatttcg
tgtcaccccgaacccagcgctcttacaccatgcgataacctcctaccgtcggtagtggtt
cgtgtggtattgtggttggtccttgtgttttccagcgcccttaacatgactgtggttctt
tcttccatcattcgtaaatgtaggaacgcatgtcgacaagctcataggcggcaaaagaca
ccggaacccgttaccaccacatcagtgacgcccgagcaacatgttatggataagttcgta
cagtcgtacgattccaccggtagcgtaagcgacacctttgagcttgctttgtgtcattta
gcatttgcggattttgtcgctggcgtgtatatcgctatcctagttgcctatgatgtgaca
acaaggggtaactttgcggaacatggtgcatggtggcagcaatcactgatgtgccgcact
gcaggcttcttcctggttatgggtcttcaattgagcttcttcacagtgcttattgctacc
gtggagcgctacttggcaacgatgttccctctaaaaccagagaaacatatcagcaaggcg
gtgctaggtctcacactcagtgctgcatgggttatatcaattgcaactgctattgtcact
ttggtcagtggcgaagaaggttttccactacaagagaggtcacgaagagtgcttccgttg
tacaacggtgcaacatgccttccatggtccacgcattttaaatacgttgcagtattggtt
ggcgggcacgttatcgcttgcttgggtattgtcattctttgcgtactgatgtactgcgca
agaaggaaacaatcttggttgtcagcacaaaagcatacgagaagacagatatcgcttact
gtcgcttgtaacgtgacactaattctcccacttgctctcataggtcttcttgcatcggca
gtaactacctatccttcagcggcggaaccttgggttttctcctctgagagcgcttactca
aatcaggagccggccaagttaaacgtggatttgttacttacgatggtcatgctgctaata
tccttacggtttgccatcaaccccctgctttacatatccttcagtgagtcgtttcggcgc
gacatgagagcagctgccggttggctctgctgtactatacgtcgaaaccgttaccatgac
tacgataccgatgatgacattgacgatggtttcacagagccaactgagtttgcatttcac
gatcctaatgctacacgacaactagaagcttctcttccagtgttcagacatgggaaaatt
gcacccgatgttattcaaagtagcggttatgagacccacgtatttggggaggaatttgcc
aacgaaccgttttacaatatgcattcggatggcgatttacaacgcaaaataacagcccgt
cgacttgaaacaacgagactcgttccagtgatgttacacgcacaagcatatgatgaagat
aggttgtcacctcagctgaatcaccatgaagcaaagtattctcagtgtaacagtcgagac
gaaaatataacaatttcgcagatgtcaccggagcgcatagctgcggaggacaataagttg
aattacgcaagtgcgcaagtcgcgaataaaacttacatcgcgcaaggcgcaagaccgaaa
tataacacacgcttgccgcctttaatttggcggaaatactccccggaagacgcggccaat
gtagacggaaaaaagctctcgcagtcgtgtgagtcctcaacctcaaaggattccgggatt
cagtcggagccagattttggtgtcgcctattcaagcgggtgcagtagtcttgcacgttcc
agtgcttccagtcacgaaaccggtgacagtctggacaacactgataccacttacgcgcgt
ggttttcttcaggtagtaggcgagagaacattaccacgcaacgaagcagcgcacacggtt
gatgcggcgcatcttaaattgaatatagcagcgaacgatgtcaggttagagaaagttgat
ttgtgtgaattaccgaaagtcggtgaaaccgttttatga
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