KEGG   Ciona intestinalis (yellow sea squirt): 100181417
Entry
100181417         CDS       T01056                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03020  RNA polymerase
cin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    100181417
  09124 Replication and repair
   03420 Nucleotide excision repair
    100181417
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100181417
   03400 DNA repair and recombination proteins [BR:cin03400]
    100181417
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     100181417
  RNA polymerase III system
   RNA polymerase III
     100181417
  RNA polymerase I system
   RNA polymerase I
     100181417
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      100181417
SSDB
Motif
Pfam: RNA_pol_Rpb6 YBL010C_LAA2
Other DBs
NCBI-GeneID: 100181417
NCBI-ProteinID: XP_026691206
LinkDB
Position
8:2758225..2759570
AA seq 128 aa
MSDHEDDFDGFGDDGGDMDDVGDANELDAVEDEGQGVEILDATEGRQIEPTKRITTPYLT
KYERARVLGTRALQLSMNAPVMVELEGETDPLQIAMKELKAKKIPIIIRRYMPDGSYEDW
AIDELIIE
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtctgaccatgaggatgattttgatggctttggtgacgatggaggagacatggatgat
gttggagatgcaaatgagcttgatgctgttgaggatgaggggcagggtgttgagatttta
gatgcaaccgaaggtcgtcaaatagagccaactaagaggatcactacgccttatttaacg
aagtacgaacgtgctcgagttcttggaacgagagcgttacaactttcaatgaatgctccg
gtaatggttgaactcgaaggggaaactgacccacttcaaattgcgatgaaggaattaaaa
gcaaagaaaattccgattataataagacggtatatgcctgatggcagttatgaagactgg
gctattgatgaattaattatcgagtaa

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