Ciona intestinalis (yellow sea squirt): 100181466
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Entry
100181466 CDS
T01056
Name
(RefSeq) probable lysosomal cobalamin transporter
KO
K14617
LMBR1 domain-containing protein 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04977
Vitamin digestion and absorption
cin04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100181466
04980 Cobalamin transport and metabolism
100181466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100181466
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
100181466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PqiA
Motif
Other DBs
NCBI-GeneID:
100181466
NCBI-ProteinID:
XP_002125094
LinkDB
All DBs
Position
1:complement(8231078..8239912)
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AA seq
541 aa
AA seq
DB search
MDIPWQNSLAIWLPFPVVATVVLVLSISYYVYHLSSARCSIVCGVAFALLTTIPILLVVL
ILTDIFFVSSTKSNMGIKQAWATNQSIAKMEEMLLFTYYGVYGLLLLLLVIIFPITYFSY
QAIRTAESSRWNIFRGLMCSLFPMVVLVAIIIVSIAYSMGNIPASDTNTYKQLNLIGQLD
LPYRKIENGLISAINCVLLIGMIHCIIYTAFGMTILPVNLVKGRPNDDREQQGIEESLAQ
INQQIEDISDQAHQENRNVSENDEQRICFYSNQLNQLQMESENLRHRSYSCWTRLNILLR
PLQITTGVVLCLFSWLIIVTIVLTNINRWISSYGSNTGYLADKYIVPNPVYELLLLCHGA
FPIHYVLLGGILFYFAFSTMVGMKHLGLWFFWIRVHNIRKNNTLPHALLYSSVIFATVVM
YSISLVYSIAPQYAMYGTQTYQVETQLNWTTVAMQNSLNSLKPCTLESPADECTMTRFMS
FQVKFFYRMWVFGVVFYSSNWLLVLVFVIGFFVSVVRFRKTAAENLLNQMRSESQEHLVQ
S
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggatattccttggcaaaattcactagctatatggttaccgtttcccgttgtcgcaacg
gttgttctggtcctttctatctcctactatgtgtatcaccttagcagtgccagatgttcg
atagtgtgtggagtggcttttgccctcctaactactatacccatcctgcttgtagttctg
atcttaactgacatatttttcgtatcctccaccaaatcaaacatgggcattaaacaggca
tgggctacaaatcaatctattgcaaaaatggaagagatgctactgtttacttattatggt
gtttatggcttgttgctgttgttgttggtcatcattttcccaataacttatttttcatac
caagctattaggacagctgaatcttctagatggaatatttttcggggtcttatgtgttcg
ttgtttcctatggtggtactggtggctattatcattgtcagcatagcatattcaatggga
aatattccagcaagcgacacaaatacatacaaacaattgaacttgatcggacaactggat
ttaccatatcgcaaaattgaaaatggtttgatttctgcaataaattgtgttttattgatc
gggatgattcactgcataatatacactgcatttggaatgacaatcctgcctgttaattta
gttaaagggcgtcctaatgatgatagagagcaacaaggcatagaggaatctcttgcacaa
ataaatcaacagatcgaagatatttcagatcaagcgcatcaagaaaacagaaatgtcagc
gaaaacgacgagcaaagaatttgtttttattccaaccaacttaatcagcttcaaatggag
agtgagaacttacgacatcgaagttattcttgttggacgagattgaacattcttttacga
ccgttgcaaattacaaccggagtcgtcctttgtctgttctcatggctgatcattgtcaca
attgtgttaaccaacataaatcgatggatatcttcatatggaagcaacactggataccta
gctgataaatacattgtccctaatcctgtatatgaattgttgttgttatgtcatggggct
tttccaattcactatgttttacttggagggattctgttttactttgcatttagtaccatg
gttggtatgaagcatctcggtctgtggttcttctggataagggttcacaatataaggaag
aacaacacccttccccatgctttgttatacagcagtgttatatttgctactgtagtcatg
tattctatatctttggtgtattctattgcaccacagtatgcaatgtacggaacacaaact
tatcaggttgaaacccagcttaattggacgactgttgcaatgcaaaactcattgaactct
ttgaagccatgtaccttggaatcaccagcagatgagtgtacaatgacaaggttcatgtca
tttcaagtcaaattcttctacagaatgtgggtgtttggtgtggttttctactctagcaac
tggcttttagttttggtattcgtaattggcttttttgtctcggtcgtccgattccggaaa
acagcagccgagaatttactgaatcaaatgcgaagtgaaagccaagaacacttggttcaa
agttaa
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