KEGG   Ciona intestinalis (yellow sea squirt): 100181502
Entry
100181502         CDS       T01056                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100181502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cin03021]
    100181502
   03036 Chromosome and associated proteins [BR:cin03036]
    100181502
Transcription machinery [BR:cin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100181502
   Coactivators
    SAGA/TFTC/STAGA complex
     100181502
Chromosome and associated proteins [BR:cin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     100181502
    STAGA complex
     100181502
    TFTC complex
     100181502
    SAGA complex
     100181502
    SLIK complex
     100181502
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF TAF4 CENP-T_C TFIID-31kDa Histone Tic110 TAF10 TFIIA
Other DBs
NCBI-GeneID: 100181502
NCBI-ProteinID: XP_002130711
Ensembl: ENSCING00000002006
LinkDB
Position
6:111748..114894
AA seq 234 aa
MDVSAHTLSLQQTLKGVEAKLLFLGNGPHNAQQANEHQTLTALKQRLMEQIQASIQTTGQ
QQQQQTSQNTAVLTNPSPQSSSPLITPPTLPNQTVVKPAISQLPQVVLSKPRPPAPQFIT
QVPQEKDNKILNRQRLQELIREIDPAEQLDEDVEEMLMQITDDFIENVVSASCELAKHRN
SNTLEVKDLKLHLDKQWNISIPGYGSEEIKPFKKPTTADAHKQRLALIRKAIKK
NT seq 705 nt   +upstreamnt  +downstreamnt
atggatgtatcagcgcacacgctttcccttcaacaaactttaaagggagttgaagccaaa
ttgttatttctcggcaatgggccacataatgcccaacaagctaacgaacatcaaacttta
acagctttaaaacaacgtcttatggaacaaatacaagcatcaatacaaaccacgggccag
cagcagcaacagcaaacctctcaaaacacagcagtgttgacgaacccaagcccccaatct
tcgtcacccctaataacgccacccaccctaccaaaccaaactgtagtcaaacctgcaatt
tcccaacttccacaagttgtcctcagcaagccaagaccaccagcccctcagtttatcacc
caagtaccacaggaaaaagataacaagattcttaacagacagaggttgcaagaattgata
agagagattgatccggctgaacaactggatgaagacgttgaagagatgctaatgcaaata
acggatgattttattgaaaacgttgtatccgcatcatgtgagttagcaaaacacaggaac
tcaaatacattagaagttaaggatctaaagttacacctagataaacaatggaatatttca
atacctggttacggttcagaagaaattaagccatttaagaaaccaacaacagcggatgct
cataaacaacgtttagcgcttattagaaaagctatcaaaaaatga

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