Ciona intestinalis (yellow sea squirt): 100181514
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Entry
100181514 CDS
T01056
Name
(RefSeq) serine--tRNA ligase, mitochondrial
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100181514
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cin01007
]
100181514
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100181514
Enzymes [BR:
cin01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
100181514
Amino acid related enzymes [BR:
cin01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
100181514
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
100181514
Prokaryotic type
100181514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ARMH3_C
Cas_Cmr5
Motif
Other DBs
NCBI-GeneID:
100181514
NCBI-ProteinID:
XP_002123180
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All DBs
Position
13:complement(1125827..1127818)
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AA seq
577 aa
AA seq
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MHNIKSACRLLRIRSCSPCIAHKYIRKSTLIQHHRNVSTAQCGNNTQETTKESKNVPSQH
KVIQFLEEEPEFVRRLNSDFAEPYTDISKLRDFIMNPRGRNYSNSALVEFYEKAKLLKPA
VDVKYMLDNLDKVQENMKMRNCDFDLVKMVVQPYKRMILVQNEVEKYNEMKESVKSQIEN
VHQMNFDGLTLEKQMAKLEQSLQYANNILHILNWVKRQVEAVFLANALMVPNQTHPLAKD
GATEGNVIETVGNKPEFDFPVHDHIFIGEKLKLFRQSRMSDFAGHRNYYLSGDAAELEQA
LIQYTLDKLKARNFHFISTPNILKDAMLEGAGVVSNKMEDLLYNIENASADGFCLAGTSE
IGLAAYFSSHAILESQLPIKVCAVSTCYRKETGTRLDPKGLFRVHQFNKVEMFGVTGNES
GNESEQLQLEFVEIQKELFSDLNLHYNVIDMPANDLGLPAFRKIDIEAWFPGRDRYDEIS
SASNCTDFQSRRLHILYKHDDKYKFAHTVNATACAVPRMIIALLENGQQKDKTIVVPECL
REYMGGKVILKRDKRRKAMEYIGIKASKKNQRCLADF
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcacaacattaaaagtgcatgtaggttgttaaggataagatcgtgttccccatgtatt
gcacacaagtatataaggaaatcaacattaatacaacaccatagaaatgtatctaccgcc
caatgtggcaacaatacacaagaaacaacaaaagaaagtaaaaatgttccttcacaacat
aaagtgattcagtttttggaagaagaaccagaatttgtgagaaggttgaacagtgacttt
gctgaaccttatacggacatttctaaactccgggacttcattatgaacccaagagggcga
aactatagcaacagtgcgcttgtggagttctatgaaaaagcaaagctgttaaaacctgcg
gttgatgtaaagtatatgctggataacttggataaggtacaggaaaatatgaaaatgcgg
aattgtgactttgatttggtgaaaatggttgttcaaccttataaaagaatgattcttgtg
caaaacgaggtggagaaatacaatgagatgaaggagagcgtaaaaagtcaaattgaaaat
gttcatcaaatgaattttgatggattgaccttggaaaaacagatggcaaaattggaacag
tcattacagtatgctaacaacatcctgcatattttgaattgggttaaaaggcaagtagaa
gctgttttcttagctaatgcacttatggtgccaaaccaaacacaccctttagctaaggat
ggggctacagaaggcaatgtaatagaaactgttggaaataaaccggaatttgattttcca
gttcatgatcatatttttattggtgaaaaacttaaattattcagacaaagtcgaatgtct
gattttgcaggccataggaactactaccttagtggtgatgcagcagagttagaacaagca
ctaattcaatatacattggacaagctaaaagcgagaaattttcattttatatcgacgcca
aatattctgaaggatgcaatgttagaaggggcaggcgttgtgtctaataaaatggaggat
ctgctgtacaacattgaaaatgcttctgcagatggtttttgcttggcaggaacatcagag
ataggattagctgcttatttttcaagccacgctatcttagaatcgcagctgccaattaaa
gtatgtgctgtgagtacttgctacaggaaagaaactggcacaaggcttgatccaaaagga
cttttcagagttcaccaatttaataaagttgaaatgtttggagtgacaggaaatgaaagt
ggcaacgaaagcgaacaactccaactagaatttgtcgagatacaaaaagaacttttcagc
gatcttaatttacattataatgtgattgacatgccagcaaacgacctgggattgccggcg
tttcgtaaaatcgacattgaagcttggtttcctggtcgtgaccgctatgatgagatatca
agtgcttcaaactgcactgatttccaatccaggagactccatatattatataagcatgac
gataaatataaatttgcacatacagtgaatgctaccgcatgcgcagtgcccagaatgata
attgcgttactcgaaaatggacaacaaaaagataaaactattgtggtacctgagtgctta
agagaatatatgggtggaaaagtcattttaaagagagataaaaggagaaaggcaatggag
tatattggaattaaagcttcgaaaaagaaccagcgttgtttagcagatttctag
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