Ciona intestinalis (yellow sea squirt): 100181523
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Entry
100181523 CDS
T01056
Name
(RefSeq) McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin
KO
K09492
McKusick-Kaufman syndrome protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cin03110
]
100181523
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100181523
Chaperones and folding catalysts [BR:
cin03110
]
Heat shock proteins
HSP60 / Chaperonin
100181523
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
BBS-CCT complex
100181523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
100181523
NCBI-ProteinID:
XP_002129925
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MNRLKILPLRDDSLKSKLLELKRTFETSYGPSGKLKLFAEQSGEQSYGSSSTLFLRSVVN
LYEDDPVIKLLFTSIKEHLKNYKDFGLFCSFTCLSLLHSGLTTDVPASVVTQCYEKFLCE
ISDFISSSALSFDVSSLTSFTKLLNGVIWTKPTLKLTVNEVETWSMQMLKACIKQMPCKG
WRPSNPLPAITYQQSALKQNPQVFDGVILELYHYTASDLHDICAVVSMKQNRRVMVINLT
QIADSQTEMFKNSTKSEVNKFSENETKKFMQKIVGCKISILFSQRIVSDEIKKFLSEQSV
TVIDRIGRDAIDSVKDITRCKIIEYFCEEPIHCISTIDDIREITFNGKSYILLTNSSIPM
CSIIVFYSNPAIEHDVRHICTAALHTFWQTVNSQKVLPGGGKLEIEIARNLRRIYSNQNT
HTDIPCTKSQFLICLENFCSVFDHIGHMLHDSPNNCPVIQDCYTSKYNAIMVAVQTACMV
LGIQFHITD
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacagattgaaaatcttacctttgcgggatgacagtttgaaaagtaaattattggag
ctgaaacgcacgttcgaaacaagctatggaccaagtgggaaactgaaattattcgctgaa
cagagtggagaacaaagttatggatcgtcttcaactttgttcttacgttctgtggtaaat
ctatacgaagacgatcccgtaataaaactactgtttacaagcatcaaagagcacttgaaa
aactacaaagatttcggtttgttttgtagttttacatgcctgtcgttacttcatagcggt
ttaacaacggacgtaccagcgtccgtggtaacccagtgctacgaaaaatttttgtgcgaa
atttcagactttatttccagctcggctctcagttttgacgtcagttcattgacatcattt
acaaagctgttaaatggggtaatttggaccaagccaactctaaaacttactgtaaatgaa
gtggagacctggtcaatgcagatgttaaaagcctgcataaaacaaatgccttgtaaaggc
tggagaccaagtaatccattaccagcaatcacttatcaacagagcgcactaaaacaaaac
ccacaagtgtttgatggagttatactcgaactatatcattatacagcaagtgatttacat
gatatttgtgctgtcgtttctatgaaacaaaaccgccgagtcatggtaataaacctgaca
caaattgctgactcacaaactgaaatgttcaaaaactcaaccaaatctgaagtgaacaaa
ttctctgaaaatgaaactaaaaagttcatgcaaaaaattgtgggctgtaaaatttcaatt
ctatttagccaaagaatcgtttcagacgaaataaaaaagttcctttctgaacaaagtgtc
actgtaatagaccggataggtcgtgatgcaattgattcggtaaaggacatcacaaggtgt
aagataattgagtatttttgtgaagaaccaattcattgtattagtaccattgatgatata
agagaaattacttttaatgggaaatcgtacattcttttaacaaattcttcaattcctatg
tgttctattatagtattttattcaaatccagcaattgagcatgatgttcgacatatatgc
actgctgcgttacatacattctggcaaacagtaaacagccaaaaggttttacctggtggc
ggaaaattggaaattgaaatagcaagaaatttacgcagaatttattcaaaccaaaacacc
cacaccgatattccatgcacgaaaagtcaattcctgatttgtttagaaaatttttgttct
gtttttgaccatattggtcatatgctgcatgacagtccaaataattgccctgtaattcag
gactgttatacctcaaaatataacgctataatggtggctgtgcaaactgcttgcatggta
ctaggtatacagtttcatataacggattaa
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