Ciona intestinalis (yellow sea squirt): 100181580
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Entry
100181580 CDS
T01056
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
cin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100181580
09122 Translation
03013 Nucleocytoplasmic transport
100181580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181580
03041 Spliceosome [BR:
cin03041
]
100181580
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100181580
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100181580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC7
Orcokinin
Laminin_B
Peptidase_S10
NPV_P10
Motif
Other DBs
NCBI-GeneID:
100181580
NCBI-ProteinID:
XP_002119739
Ensembl:
ENSCING00000015312
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MASDDDVIRKRLLIDGDGGGDERRLNALMKLFIKWCNSPDPDISTHQRMLSFLAVGEFAV
AKSSFVYEMNMKQMEKYKQLQEEIDANVSLAKKEIEKCKTELAEARLIRKNRKEYDALAG
VVLQHPDRQQTEGQISELKCDLKELEANELRLVEKLDLRKKQFHALLTSINHLQIMLNEE
EEEDKRSLDVDMDDAKMDTTPEELAQKT
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgacgatgacgtgatacgcaaacggttgttgatcgacggcgacggtggaggc
gatgaacggaggttgaacgcgctcatgaagctatttattaagtggtgtaactcacctgat
cctgatatatcaacacaccaacgaatgctgtcgtttcttgctgttggtgaattcgctgta
gccaagtcatcctttgtttatgaaatgaatatgaaacagatggagaaatataaacaacta
caggaggaaattgatgcaaatgtttctctggccaaaaaagaaattgaaaaatgtaaaacc
gaacttgctgaagctcgtctaattcgaaagaatcgaaaagaatacgacgcgcttgctggt
gtggtgttgcaacatccggataggcagcaaactgagggacaaatctctgagttgaaatgt
gacttgaaagaactggaagccaacgaactaaggcttgtggagaaattggacttaaggaag
aaacagtttcatgcgttgcttacttccattaaccatctacagataatgctcaatgaagag
gaagaggaggacaagcgatcactggatgttgacatggatgatgcaaagatggatactacg
ccggaagaacttgcgcagaaaacctga
DBGET
integrated database retrieval system
