Ciona intestinalis (yellow sea squirt): 100181688
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Entry
100181688 CDS
T01056
Name
(RefSeq) tubulin alpha chain, testis-specific
KO
K07374
tubulin alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
cin04517
IgSF CAM signaling
cin04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100181688
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100181688
09142 Cell motility
04814 Motor proteins
100181688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181688
03036 Chromosome and associated proteins [BR:
cin03036
]
100181688
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100181688
04147 Exosome [BR:
cin04147
]
100181688
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100181688
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
100181688
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
100181688
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100181688
Exosomal proteins of other body fluids (saliva and urine)
100181688
Exosomal proteins of colorectal cancer cells
100181688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
100181688
NCBI-ProteinID:
XP_002130202
Ensembl:
ENSCING00000007677
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEHVDTVLD
RIRKLSDQCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEATYDICRRNLDVERPTYTNLNRMIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGIDSAEDQEEEEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagagaatgcatatcaattcatgttggtcaagctggtgtccagatgggcaatgcttgt
tgggagttgtattgcttagagcacggcatccaacccgatggtcagatgccaagtgacaag
acaattggagggggtgacgattcgttcaacactttcttcagtgagacaggagcaggaaag
catgttccaagagcagttttcgtcgacctggaaccgacggttgttgacgaaatacgtacc
ggcacgtatagacaactgtttcatcccgaacagctaatcaccggcaaagaagatgctgca
aataactacgctcgtggccactacactgtcggaaaggaacatgttgatactgtgcttgat
cgcattcgaaagctttcagatcaatgcagtggcttgcagggatttttgatctttcattcg
tttggtggtggcaccggctccggtttcacttctttgctaatggaaagactttcagtggat
tatgggaagaaatccaaactggaattcgcaatatacccagcacctcagatatctaccgct
gttgtggagccgtacaactcggttctaacaacgcatacaaccctggaacattcagactgc
gcatttatggtggacaatgaagcaacttacgatatttgccgaagaaacttagatgtggaa
agacctacttacacaaaccttaatcgtatgattggtcagatcgtttcatccatcacagct
tcgttacgttttgatggcgctttgaacgtggatttaacggagtttcaaaccaacctggtg
ccatatccacgtattcacttcccattggtcacgtatgctccaatcatctctgctgagaaa
gcttaccacgagcaattatcagtagctgagatcaccaacgcgtgctttgaaccagccaat
cagatggtgaaatgcgacccacgtcatgggaagtacatggcatgctgcatgttgtaccgc
ggtgatgttgtcccgaaggatgtgaacgctgctattgctgcgatcaaaactaaacgaacc
atccagttcgtcgattggtgtccaactggtttcaaagttggtatcaactaccaaccaccc
accgttgtaccaggtggtgatttggcaaaagttcaacgagcggtttgcatgttgagcaat
acaacagctattgccgaagcttgggctcgtcttgaccacaaattcgacttgatgtacgcc
aagcgtgcattcgttcactggtatgtcggcgaaggaatggaagaaggagaattctccgaa
gctcgcgaagatctcgctgctctcgagaaagattatgaagaagttggtattgattccgcc
gaggaccaggaagaagaggaagaatattaa
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