Ciona intestinalis (yellow sea squirt): 100181775
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Entry
100181775 CDS
T01056
Name
(RefSeq) elongation factor 1-alpha, somatic form
KO
K03231
elongation factor 1-alpha
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100181775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181775
03016 Transfer RNA biogenesis [BR:
cin03016
]
100181775
03012 Translation factors [BR:
cin03012
]
100181775
04131 Membrane trafficking [BR:
cin04131
]
100181775
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100181775
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
100181775
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
100181775
Translation factors [BR:
cin03012
]
Eukaryotic type
Elongation factors
100181775
Membrane trafficking [BR:
cin04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
100181775
Exosome [BR:
cin04147
]
Exosomal proteins
Proteins found in most exosomes
100181775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
DUF34_NIF3
Motif
Other DBs
NCBI-GeneID:
100181775
NCBI-ProteinID:
XP_002126815
Ensembl:
ENSCING00000018894
LinkDB
All DBs
Position
Unknown
AA seq
464 aa
AA seq
DB search
MVKEKLHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEASEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETVKYYITVIDAPGHRDFIKNMITGTSQADCAVLVVAAGV
GEFEAGISKNGQTREHVLLAYTLGVKQMIIAVNKMDSTEPKYSEVRFNEIKQEVTNYIKK
VGYNPKKVAFIPISGFYGDNMLEPSDNMKWFKGAELPKGDKKETKRVMTLFEALDAIEEP
KRPTDKALRLPLQDVYKIGGIGTVPVGRVETGIIKPGMLVTFSPANITTEVKSVEMHHEA
LTEALPGDNVGFNVKNVSVKDIKRGMVAGDSKNDPPKEANTFNAQVIILNHPGQIHAGYA
PVLDCHTAHIACKFDQLLEKIDRRSGKKLEENPKSVKSGDAIIAVLKPSKPMCVESFSEY
PPLGRFAVRDMRQTVAVGVIKSVEKKEAGAGKVTKAAQKAAKKK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggaaaagcttcacatcaacattgtagtgataggccacgtcgactccggaaag
tcaacgaccactggtcatctaatctacaaatgtgggggcatcgataaaagagcgatcgag
aaattcgaaaaagaagcatccgagatgggtaaaggatcgttcaagtatgcctgggtgttg
gacaaactgaaagcggaacgagaaagaggaatcacaattgatattgcactttggaagttt
gaaacggttaagtattacatcacggttattgatgcacctggtcaccgagatttcatcaaa
aacatgattactggaacatcccaggccgactgtgccgtcttggttgttgcggctggggtg
ggagagttcgaagcagggatatcgaagaacggacagacaagagagcatgttcttcttgcc
tacacccttggagttaaacaaatgatcatagctgtcaacaaaatggacagcactgaaccg
aagtattcggaggtgcgtttcaatgaaataaaacaggaagtgacaaactacattaaaaag
gttggctataatcctaaaaaggttgcttttattccaatatctggcttctacggagataat
atgttggaaccatcggacaatatgaagtggtttaagggagcagaattaccgaagggagat
aagaaggaaaccaaaagggtcatgactttgttcgaagctttggatgcaatagaagaaccg
aaacgaccaaccgataaagcgctaagattgcctctgcaagacgtttacaaaatcggagga
atcggcacggttccggttggtcgggttgagactggtattataaaaccaggcatgctggtg
acgttttcacccgccaacattactacggaagtcaagtcggtagaaatgcaccacgaagca
ctgaccgaagcacttccaggagacaacgttggttttaacgttaagaacgtatcggtgaag
gatattaagcgtggtatggtggcaggagattccaaaaacgatccgccgaaagaggcaaat
acttttaatgcgcaggtaatcatactgaaccatccgggccaaatacacgcaggatatgct
cctgttctggattgccacaccgctcatatcgcttgcaagttcgatcaactattggaaaaa
attgatcgtcgttctgggaagaagcttgaggaaaacccaaaaagtgtgaaaagtggtgac
gccataattgctgtactgaaaccctcaaaaccgatgtgtgtcgaatcatttagtgaatat
ccaccactaggtcgctttgctgttcgagatatgagacaaactgttgcagttggggtgatt
aaaagtgtcgaaaagaaagaagccggtgccggaaaagtaacaaaagctgcacaaaaagcg
gccaagaagaaataa
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