Ciona intestinalis (yellow sea squirt): 100181802
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Entry
100181802 CDS
T01056
Name
(RefSeq) solute carrier family 22 member 4-like isoform X2
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100181802
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
100181802
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
100181802
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
Motif
Other DBs
NCBI-GeneID:
100181802
NCBI-ProteinID:
XP_002123929
Ensembl:
ENSCING00000003880
UniProt:
F6TXG4
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All DBs
Position
1:complement(2724219..2729555)
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AA seq
542 aa
AA seq
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MSEDKQDDDGKLNNTKQCGTLWSLLILVIPYTHISFILFSVVFLYRAPPLTCWTEQGNSS
TTSEHHGATLECSSWERNGNLPAYVNSSLYVQNLNDTGNQSNNLERFCKDGWTFDTSEGN
TLVSEFGLECTAAWKRPTLQSVYMIGSLFGSLFGGPITDRFGRKNTFTATFIINGCLHLP
LSFTTSYVQYIVLLHFTGFLQIVLYLAGFVLAQELVPTAKRSIAALSVNVCHGLGYLILP
LVAYFIRDWRWFLRFYTVACVCYFPILWFIPKSPKWVALHRSVSSKNEKMNAKEMETFIG
TNNNIEQVDSDKQLSSTMDLFKQPILRRRVLIVCLLWIVTTLGFYTLGLNSSNLGGNIYL
NCVYGALVDITSYVTTALILSKKGRKSATSITIGIGGIMCLITPMLRRANVNVGIASAMI
GKFFITTALSIIILYTGELFPTLLRNTTYGIASATARIGRAISPFIIFAGETMNLSIPFY
VTGCLSLLSAFMTIWLPETKATGLPNTLDEALELENYRTKISVRKLSASFRRKSEGTADT
AG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagacaaacaagatgacgacggaaaactaaataatacgaaacaatgcggaact
ttatggtcgttgcttatactcgtaattccatacacgcacatatcatttattttattcagt
gttgtgtttctgtaccgagctccgccgttaacttgttggaccgagcaagggaacagcagc
acaacatcagaacatcatggtgctacattggagtgcagctcatgggaaagaaatggaaat
ttgccagcatatgtgaatagtagcttatacgtccaaaatctaaacgacactggaaatcaa
tcaaacaacttggaacggttttgcaaagacggttggacattcgatacaagcgagggtaat
accttggtgtctgagtttggtttggagtgcacagctgcatggaaacgaccaactctgcag
tcagtgtatatgattggatctctgtttggaagtttgtttggtggaccgataaccgacagg
tttggtcgcaagaacacctttactgcaacctttatcataaacgggtgcctccatttacca
ttgtcattcaccacatcgtacgtgcaatacatcgtcctacttcacttcacaggattcctt
caaatagttctttatctagctggttttgttctagcacaagaactggtcccaacagccaag
cggagtattgcggctttgtctgttaatgtttgtcatggacttggttatctcattctgcct
ttggtcgcgtatttcatccgtgactggcgttggtttcttcgcttctacacggtcgcatgt
gtttgctactttccaatattatggttcattcccaaatcacctaaatgggtggcccttcac
cgcagtgtatcatcaaagaatgaaaaaatgaatgctaaagaaatggaaacgtttatcggt
acaaataacaacattgaacaggtagattcagataagcaattgtcttctactatggatcta
ttcaagcaacccattttgagaaggcgtgtgttgattgtgtgtttgctgtggatcgtaact
actcttggcttctatactctcggtttaaactcttccaatctgggcggaaatatttatctt
aactgcgtttatggagcccttgtcgatataacgtcctatgttacgactgctttaattttg
agcaagaaaggacgaaaaagtgcaacatcaattacaattggtatcggtggaatcatgtgt
ttaattacaccaatgttgaggcgagcaaatgttaacgttggaatagcaagtgcgatgata
gggaagttttttattacaaccgcattgagcattataatcttgtacactggtgaacttttt
ccgactttactgagaaacacaacctacgggatagcttcagcgacggcaaggattggaaga
gctatttctccgtttataatatttgctggtgagaccatgaatttatccatacctttctac
gtgacgggttgcctttcacttttgtctgctttcatgacgatttggctacctgagacaaaa
gcgactggtttgcccaatactctagacgaagcgcttgaacttgaaaactataggaccaag
atttctgtgagaaagctatcagcatctttccgaagaaagagtgaaggaactgcagacacc
gcaggctaa
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