Ciona intestinalis (yellow sea squirt): 100181821
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Entry
100181821 CDS
T01056
Name
(RefSeq) cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100181821
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cin01001
]
100181821
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cin03021
]
100181821
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
100181821
2.7.11.23 [RNA-polymerase]-subunit kinase
100181821
Protein kinases [BR:
cin01001
]
Serine/threonine kinases: CMGC group
CDK family
100181821
Transcription machinery [BR:
cin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
100181821
Brd4/P-TEFb complex
100181821
7SK RNP complex
100181821
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
YrbL-PhoP_reg
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
100181821
NCBI-ProteinID:
XP_002131004
Ensembl:
ENSCING00000008843
UniProt:
F6R4H2
LinkDB
All DBs
Position
4:4484752..4488174
Genome browser
AA seq
376 aa
AA seq
DB search
MAKGLDPNMDFPFCQDVLKYERITKIGQGTFGEVFKARDRKTDRLVALKKVIMENEKEGF
PITALREIKILQLLKHENVVDLIEICRTKPTQYNRSKGSIYLVFEFCAHDLAGLLSNATV
KFTLGEIKKTMLQLLEGLFYIHRNKILHRDMKAANILITKNGVLKLADFGLARAFSYTKT
GQANRYTNRVVTLWYRPPELLLGDRDYGPPIDLWGAGCIMTEMWTRSPIMQGHTEQQQLT
LISQLCGSITKQVWPGVEKYDLFTKMELPTGQKRRVKERLKAYVRDQYALDLIDKLLSLD
PKHRIDSDEALNHDFFWTEPLPCDLTNMLSQHKTSMFEYLAPPRKPTTSAAHPHYRNPPA
QAARQQPTDPAYDRIF
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagggattggatcccaacatggactttcccttctgtcaagatgttttaaaatat
gaaagaataaccaaaattggacaaggaacttttggtgaggtgtttaaagcaagagataga
aaaactgatcgtcttgttgcactgaagaaagtaatcatggagaatgaaaaggaagggttt
cccatcactgcgttacgtgaaataaagattcttcaacttcttaaacacgagaatgtggtt
gaccttatcgaaatatgtcgcactaaacctacacaatataacagatcaaaaggatccatc
tacctagtatttgaattctgtgctcatgacttggctggtttgctgagtaatgctacggtg
aaatttacactgggggaaattaaaaagacaatgctccaattattggagggattattttac
attcatcgaaacaagatacttcatcgagacatgaaagctgccaatattcttatcaccaaa
aatggagttcttaagttggctgactttgggttagccagggcttttagttacacgaaaact
ggtcaggcaaatcgttatacgaatcgtgtcgtaacgttatggtatcgaccaccggagctg
ttgctaggcgaccgtgattatgggccacccatagacttatggggggcaggttgtattatg
acagaaatgtggactaggagtccaattatgcagggacacacagagcagcagcagttaact
ttaatcagtcaactttgtggttctatcaccaagcaagtgtggcctggagtagaaaaatat
gatttattcactaagatggaacttcctactggtcaaaaacgaagagtgaaagaaagattg
aaggcctatgtacgagaccagtacgcgctcgatttaattgataaattattaagtttagac
ccgaaacatcgaatcgattctgacgaagcactcaatcatgatttcttttggaccgaacct
ctcccatgcgaccttaccaatatgttgtctcaacacaaaacatccatgtttgaatatctt
gccccgccaagaaaaccaactacatcagccgctcacccacactacaggaaccctcctgcc
caagccgctcgacagcaaccaacagacccagcttacgatcgaattttttaa
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integrated database retrieval system