Ciona intestinalis (yellow sea squirt): 100181855
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Entry
100181855 CDS
T01056
Name
(RefSeq) tropomyosin, smooth muscle/fibroblast CTM1-like
KO
K10373
tropomyosin 1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100181855
04820 Cytoskeleton in muscle cells
100181855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100181855
04147 Exosome [BR:
cin04147
]
100181855
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
100181855
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of microglial cells
100181855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
HAUS1
XhlA
Sec2p
DUF1664
TMF_DNA_bd
Bcr-Abl_Oligo
KH_DEAH11_2nd
MscS_porin
PUMA_CC
SlyX
Uds1
Motif
Other DBs
NCBI-GeneID:
100181855
NCBI-ProteinID:
XP_002128311
LinkDB
All DBs
Position
3:complement(4229144..4232015)
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AA seq
277 aa
AA seq
DB search
MEAIKKKMTMLKLDKENALDRAEQAEIDRKSAESKAKELEEQLLGLGKRVKATEDELESA
QEKLRLANEDLEKAEKKAADAEEEVSALNRRICLVEEELDQAQERLTISLQKLEEAEKAA
DESERGRKVIENRALKDEEKLEAQEVSLNEAKSVAEDADKKYEEVARKLVNVESDLERGE
ERAELAEGKATELEEELKTAANSLKSLEAAAEKYSAKEKSYEEEIKCLSDKLKDSENRAE
FAEKSVVQLERSIDDLEDELYKQKMQLRNFNEEVSAY
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatcaagaagaagatgactatgttgaaattggacaaagagaatgcactcgac
agagccgaacaagcagaaatcgaccgaaaaagcgcagagagcaaagcaaaagagcttgag
gaacaacttcttggtttgggcaaacgagtcaaagcaacagaggacgaattggaatctgcc
caagagaaattgagacttgccaatgaagatttagagaaagccgagaagaaagctgctgac
gccgaagaagaagtgtcggcattgaaccgacgtatctgtctcgttgaagaagaattggac
caagctcaggagagacttaccatctctttgcaaaagttggaagaggcagagaaggcagct
gatgaaagtgaacgaggtcgcaaggtcattgagaaccgagctttgaaggatgaagagaaa
ttggaagcacaagaagtttcattgaacgaagccaagagcgtcgctgaggatgctgataag
aaatatgaggaggttgcgagaaaacttgtcaatgtggaaagcgaccttgaacgtggcgaa
gagagagccgaactcgctgaaggaaaagcaactgaactcgaagaggaattgaaaacagcg
gccaacagtttgaaatcgttagaagctgctgctgaaaagtattctgccaaagagaaatct
tacgaagaagaaatcaaatgtttgagtgacaaattgaaagactcggaaaacagagctgag
ttcgctgaaaaatctgttgtccagttggagagaagcattgacgacctggaagacgagctc
tacaaacaaaagatgcagctccgaaacttcaacgaagaagtctctgcttattaa
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