Ciona intestinalis (yellow sea squirt): 100181864
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Entry
100181864 CDS
T01056
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100181864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
100181864
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100181864
U7-dependent histone pre-mRNA processing factors
100181864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
Extensin_1
RRM_7
RRM_10
RRM_Rrp7
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
100181864
NCBI-ProteinID:
XP_026694426
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MNMRDRDPVDYERSIRSVFVGNIPYEATEEQLKDIFNEVGNVISFRLVFDRESGKPKGYG
FAEYQDKETALSSMRNLNGRELHGRPLRVDHATSERNRNVQDEFNNLRSMAPPVESDYGD
ATSPQDAPEAISKAVASLPPEQMFELMKQMKQCIQNNPVEARNMLLQNPQLAYALLQAQV
VMRIVDPEIAMKMLHRQTPVQPLIPPNDKPRPEMVSEVGCIWVGVGVRHAMGPGVILRQN
GGPLPGLGGFPDERMMRDREPMEHMDRNNINSHMMGGGPHRVGRNMERGDHMTDMHHRPP
PHMDQRPGSPDRFGRDRNLDPNFQDRESMERGGGRGRGPPMERTPMDRPPMDRGPMERGP
MDRGPMDRPPMDRGPPMDRGMMEQNMGRGGPPMDRGPPMDRGRSSMDRGGPPIMGGRPPM
LRGGDGSSDPRRGPQRNAMDEPTSEQDHEKAALIMQVLQLTPQQITMLPEEQRKSIMALK
DQLQRQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcgagatagagacccggtggactacgaaagatctatccgttctgtattcgtt
ggcaacataccatacgaggcaacggaggaacaattgaaagatatttttaatgaagttgga
aatgttatcagtttcagacttgtgttcgaccgcgaatcaggaaaaccgaaaggttatgga
ttcgcggagtaccaagataaagaaaccgcgttaagttcgatgagaaatcttaatgggagg
gaattacacggtcgcccgttacgagtggatcacgctacaagtgaaagaaacagaaacgtg
caggatgaattcaacaaccttcgctccatggctccgccggtggaatcagattacggagac
gctacctcgccacaagacgcccctgaagccatcagtaaagctgtagcgagtttaccacct
gaacaaatgtttgaactaatgaaacaaatgaagcaatgcattcaaaacaaccccgtcgaa
gcccgcaacatgctgctacaaaacccacaacttgcgtacgcgttgttacaagcacaagtt
gttatgagaatagtagatcccgagatagctatgaagatgctgcatcgccaaacacccgtt
caacctcttatcccacctaatgataaaccaaggccagaaatggtaagcgaggttggttgt
atatgggtgggggttggggttaggcatgctatgggacctggggtgattctcagacagaac
gggggtccattaccggggttaggtggtttccccgatgagagaatgatgcgtgatcgtgaa
cccatggaacatatggacagaaataatataaatagtcacatgatgggtggagggccccat
cgtgtgggtcgcaacatggagaggggtgatcacatgactgacatgcatcatcgaccacca
ccacatatggatcaacgtcctggtagtcccgatcgattcgggagagatcgtaacctggac
ccaaacttccaagatcgcgaatcaatggaaagaggtgggggtaggggtagagggccccct
atggagcgtacacccatggatagacccccaatggacagggggccaatggaacgagggcca
atggaccggggcccaatggaccggccccctatggaccgtggaccgccaatggatcggggc
atgatggaacaaaatatggggcgaggtgggccgcccatggatcgtggcccgccaatggat
agaggtcgttcttcaatggaccggggaggacccccaataatgggggggagacctccgatg
ttgagggggggtgatggatcatcggacccacgtaggggaccccaacgtaacgcgatggat
gaacccacatcggagcaagaccatgagaaggccgcgttaataatgcaagttctccaactc
accccccaacaaatcaccatgttacctgaggaacaacggaagagcattatggctctaaag
gatcaactacaacgacaataa
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integrated database retrieval system
