KEGG   Ciona intestinalis (yellow sea squirt): 100181871
Entry
100181871         CDS       T01056                                 
Name
(RefSeq) syntaxin-5-like
  KO
K08490  syntaxin 5
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    100181871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100181871
Membrane trafficking [BR:cin04131]
 SNARE
  Syntaxin (Qa)
   Stx-cisGolgi
    100181871
SSDB
Motif
Pfam: SNARE Syntaxin-5_N BLOC1_2 Spectrin
Other DBs
NCBI-GeneID: 100181871
NCBI-ProteinID: XP_002126270
Ensembl: ENSCING00000010411
LinkDB
Position
10:161145..164347
AA seq 361 aa
MAARHRFSNQNSAPNTWTQGVTQTITNSFTKFTTKQDESAENSDHEETIEAMNNASRDRT
TEFHSVLKSLKSRQSNGTSPRPTAKQSLAQRSEFTRFAKHIGQDLSKTYEKLEKLTLLCK
KRTLFDDRPVEIQELTYIIKQDIDSLKRKIQQLEENKSQASSKRDAQKHSTSIVRTLRSK
LANMSENFKSVLEVRRENMKKQKLRKDQFSSSNLSSSMPVSATQGHSHGSVLLMDEQRST
SNPSGSVAISMDGGSYSQNQTVQLVEQQDSYITERASTMETIESTIVELGNIFQQLATMV
KEQEEQVMRIDTNVEESELNIEAAHGEVLKYFQGITSNRWLMIKIFLILISFFVVFVVFF
A
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggctgcacgacaccgattttctaatcagaactccgcaccaaacacttggacgcagggt
gtcacacaaactatcacaaactctttcaccaagtttacgacaaaacaagacgagtcagcg
gaaaatagcgaccacgaggaaacaattgaagcgatgaataacgcaagtcgtgatcgaact
accgagtttcattccgttctaaaatcgcttaaatccagacagtccaatggaacttctccg
cgtccaaccgcgaagcaatcactcgcgcaaagaagtgaattcaccagatttgcaaaacac
attggacaagatctttcaaagacttatgagaaactagaaaaactcacactgttatgcaaa
aagcgaacattatttgatgaccggcccgttgagatacaagaattaacttacatcataaaa
caagatatcgattccttaaaaagaaaaattcaacaattagaagaaaataaatcgcaagcg
agctcaaaacgagatgcacagaaacattcaacgtctattgttcgtacactgaggtcaaaa
ctcgcaaatatgtcggaaaattttaaatctgttcttgaagtccgacgagaaaatatgaaa
aaacaaaaacttcgcaaagatcagttcagtagctccaacctcagctcatcgatgccggta
tcggccacacaaggacattcccatggttcagttttattgatggacgaacaacgttcgact
tccaatccatcgggttcggttgctatttctatggatggcggttcgtattcacagaaccag
accgtgcaattggtcgaacagcaagatagttacataacagagcgtgcaagtaccatggaa
acaatagaatcgaccatcgtggaactcggaaatatcttccagcaacttgcaaccatggta
aaggaacaagaagagcaagttatgaggattgacaccaacgtagaggaaagtgaattaaac
atcgaagctgcacacggagaagttctcaagtattttcaaggcatcacctcaaacagatgg
ctgatgatcaaaatatttctaatcttaatttcattttttgtcgtttttgtcgtcttcttt
gcttag

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