Ciona intestinalis (yellow sea squirt): 100181916
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Entry
100181916 CDS
T01056
Name
(RefSeq) denticleless protein homolog isoform X1
KO
K11790
denticleless
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100181916
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100181916
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
100181916
NCBI-ProteinID:
XP_026691449
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All DBs
Position
8:complement(528982..531960)
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AA seq
662 aa
AA seq
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MLHYLNQRSLFGKGHASFSNSSNVEVLLKEKWLKSLKCMPDNKFTLTDPMGVRTPPFACD
FCTVPGREDICLVVDEDGYVHVIDTFHGTSGRNTGLIDQWQSHKNAVFDVAWFHQSNQFV
TASGDLTAVLWDVLRPQERLQTFTGHSCSVKSISLSKDNTNLFVSGSRDGNALVWDCRIS
NTNQPVLRIQDAHAIHDALTPQRKRRRKTDYNNQLLLDSRQTVSSVCFQDLNTVITAGAM
DGTIKLWDIRKTVPLKSVKGKSCSLPKESIQYSGMSSRRRGYTCLTLDSTRTKLFASCTD
NTIYEYDLMEFVSSGSRLPVKKYTGHHSSSFFVRIKLSPDNNFLLSGCDDEMAFIWNISG
SKTNDVQPRFCLKSAGMEQVTAVSWCPSDWRKVVTCSDDCSFRVWNVPVSPCANTNAVVE
GFCESVVVEKINKQTAMSPVQKSFANEKTCVLQPVLSVQKSQLLLNSENVPSKTEEKRKT
PTSIKHWLAHSAALTSKTKAVKKLEEKYQQSNDNKENDGWVLPPTLPVCKNDALGTPPTD
TLLIKPIVKTDATPSKTSNWIAELSKRKLANKTNSPNQSRSKQHKSSGLSSSSNSSATPS
KTSNWIAELSKRKLANKTNSPNQSRSKQHKSSGLSSSSNSSDINSNPCKRRRSIQSYFSL
NL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgttacattatctgaatcaacggtcgctgtttggaaagggtcatgcttcgttttctaac
tcaagtaatgttgaagttttactaaaagaaaagtggttaaagagtttaaagtgtatgccg
gacaataagtttacacttactgatcccatgggagtcaggacacccccatttgcttgtgac
ttctgtacagttcctggaagggaagatatatgccttgtagttgatgaagatggttatgtg
catgtgattgacacatttcatggaacttctgggcgtaatacaggactaatagatcaatgg
cagtcccataaaaatgctgtatttgatgtggcttggtttcatcaaagtaatcagtttgtt
actgcgtccggtgacctgactgctgtgttgtgggatgttttacgtcctcaggaaagattg
caaacgtttacaggtcatagttgcagcgtcaagtcgataagtctatctaaagacaataca
aacctttttgtgtctggatcaagagatggaaatgcacttgtgtgggattgcagaattagt
aacacgaaccaaccagtgttaagaatacaagatgctcatgcaattcatgatgctttaact
ccacaaagaaaaaggagacgtaaaacagactataacaatcagctcttattggactctcgt
caaacggtttcaagtgtttgttttcaagacctaaatactgtgataacagcaggtgcaatg
gatggtacaataaaactatgggatattcgaaaaactgtgccgttaaaatcagttaagggt
aaatcatgctcattgcctaaagaatctatacaatatagtggtatgagcagtcgtagaaga
gggtatacgtgtctaacattggattcaactcgaaccaagttatttgcatcatgtactgac
aatactatttatgaatatgacttaatggagtttgtttcatctggtagcagattgccagtg
aaaaaatatacaggtcaccatagctcttcattttttgttcgaatcaagcttagtccagat
aacaattttcttctgagtggatgtgatgatgaaatggctttcatctggaacattagtggc
tctaaaaccaatgatgtccaaccaaggttttgtctgaaaagtgcaggcatggagcaagta
actgctgtttcctggtgtccttctgattggaggaaagttgtaacctgttcagatgattgc
tcgtttcgtgtatggaatgtccctgtttcaccatgtgctaatacaaatgcagttgtggaa
ggattctgcgaatctgttgttgtggagaaaatcaataaacaaactgctatgagccctgtg
cagaagagttttgcaaatgaaaaaacttgtgtgcttcaacctgtacttagtgttcaaaag
tctcagttactattaaacagtgaaaatgtcccatcaaaaactgaagaaaaacggaaaacg
ccaacttctattaaacactggcttgcacacagtgcagctcttacaagcaagaccaaagct
gtgaaaaaacttgaagaaaaatatcaacagtcaaatgataataaagaaaatgatggctgg
gtgttgcctcctactttaccagtatgtaagaatgatgcattaggaactccacctaccgat
actttactaattaaaccaattgtcaaaactgatgctacaccaagtaaaactagcaactgg
attgctgagttaagtaaaaggaaacttgccaataaaactaattctccaaaccagagtcga
tcaaagcaacataaaagttcaggactttcttcttcaagcaatagcagcgctacaccaagt
aaaactagcaactggattgctgagttaagtaaaaggaaacttgccaataaaactaattct
ccaaaccagagtcgatcaaagcaacataaaagttcaggactttcttcttcaagcaatagc
agcgatattaatagtaacccttgcaaaagacgtagatcaatacaatcatacttttcttta
aatttatga
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