Ciona intestinalis (yellow sea squirt): 100181944
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Entry
100181944 CDS
T01056
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
100181944
Ion channels [BR:
cin04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
100181944
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
100181944
NCBI-ProteinID:
XP_009861923
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MPPKRKVGSKPNESKNDPTPEVPQIFLATESSSDVPQFSVQVDDHDVEASTNNLTNNMVI
ASEPTVSYLAMNMDPGLVRRKSQQFEANIKAEEEEHVREALEKERKQVEKLVSSRSVTQG
SISSAMHLHPDKSSFRRGVTGSMSIPMNKMSLKLYGSEKAVIEEQERLKKAGSWIIHPYS
NFRFIWDSFTLVLLLVNIILIPVIISFWKDDDSAWLPFKAVSDTWFLTDIIINFRTGIVI
DGPDSEVILDPKQIRMMYLKTWFTIDLVSTFPFDLVFTIIDGASSMAETGLKALSLLRFA
KILALLRLLRLSRFIRYMKQWEEIFNFQYEMALAFARIFNLIMLMLFICHFNGCLQYMVP
MFLDFPEKTWVRDRNLHLSNVTIWERYSWSVFKSTSHMLCIGYGLFPPQGLVDVWVTYVS
MCSGAMCFALFIGNATSLIQSMDASKRAYKEKYMQVKEYMQFRKLPSGLRHRISDYYENR
FQGKMFDEERILTELNHNLRDEVIQYNCKDLVDQVPFFNEADPSFVAAMLGKLNFEVFLN
DEVIVKEGTEGKKMYFINRGTVTIKSAQHKIEQSLSDGCYFGEIALLQQNLRRVASVTAE
TYCYLYSLSVDDFNEVLKEFPRQRAKLQHVAQARLKDNTAQDSFTSTCSIIPLDGPRERS
QPGSSNLSEITEESSGMLDDYNKSAKKK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgaaacggaaagtgggctcaaaaccaaatgagagcaaaaatgatcccacaccc
gaagtacctcaaattttcttagcaaccgaaagtagcagcgatgtaccgcaattttcggtt
caagttgatgatcatgacgttgaggcgtctaccaataacctcacgaacaatatggttata
gcatcggaaccaactgttagctatctcgctatgaacatggacccgggtctcgtccggaga
aaaagtcagcagttcgaagcaaatattaaagcagaagaagaagaacacgtaagagaggcg
ttagaaaaggaacgaaaacaggtcgagaagctcgtatcatcccgttcagttacacaaggt
agtatttccagcgccatgcatttgcacccagataagtcgtcttttagaaggggcgtgacg
ggctcaatgtcgattccaatgaataaaatgtccctcaaactttatggtagtgaaaaagca
gtaattgaagaacaggaacgtctaaaaaaggccggaagctggattattcacccttacagt
aattttcggtttatatgggactcgttcactttggttttattgctggtcaacattatttta
atcccggttatcatttctttctggaaggacgacgattctgcttggttgccatttaaagcc
gtttccgacacatggttcctgaccgatattattatcaattttcggactggaattgtaatt
gatgggccagacagtgaagtgattttggatccgaaacaaatacgaatgatgtaccttaaa
acttggtttaccattgaccttgtctcaacttttcctttcgatctggtttttacgataatc
gacggggcctcctctatggcagagacgggcctcaaagctcttagcttgctcagattcgcg
aaaattctcgctctgttgcgcctcctgcggctgtcgaggttcatccggtacatgaaacaa
tgggaggagatattcaatttccaatacgagatggcgcttgctttcgctcgaatattcaat
cttattatgctaatgttgtttatttgtcatttcaatggctgtctccaatatatggttcct
atgtttctcgactttccggagaaaacgtgggttcgagaccgtaatcttcatttgagcaac
gttactatttgggagcgatactcgtggtcagtattcaagtccaccagccatatgctttgc
attggatacggtttgttccctcctcaaggcttagttgatgtatgggtgacgtatgttagc
atgtgttctggtgcaatgtgctttgctctctttattggcaacgcaacctctttgattcaa
tccatggacgcatcgaaaagggcttacaaggaaaagtacatgcaagtaaaggaatacatg
caattccgcaaactaccttctggtctacgtcaccggatctcggattattatgaaaaccga
ttccaaggaaaaatgtttgacgaagaacgaattctgacagaattaaaccataacttgaga
gacgaggtaatacaatacaactgcaaagatttggtcgaccaagttccatttttcaacgaa
gctgacccaagtttcgtggccgcaatgttgggaaagcttaactttgaagtttttctcaat
gatgaagttattgtcaaggagggaacagaaggtaagaaaatgtattttatcaaccgaggt
acagtcacgatcaagtccgcccagcataaaattgaacagagcttatctgatggatgttat
ttcggagaaatagcgttactacagcaaaacctacgacgagttgcaagcgtgacagccgag
acgtattgctacctgtactcactgtctgtagatgatttcaacgaagttctgaaggaattt
ccaagacagcgagccaagttacagcatgttgcacaagctagattgaaagataataccgct
caagattccttcacgtctacatgttctataataccgctagatggtccccgcgagcgcagc
caacctggaagcagcaaccttagtgaaataaccgaggaatcatcgggaatgttagacgat
tacaacaagtctgctaaaaagaaataa
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