Ciona intestinalis (yellow sea squirt): 100181988
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Entry
100181988 CDS
T01056
Name
(RefSeq) serologically defined colon cancer antigen 8 homolog
KO
K16488
serologically defined colon cancer antigen 8
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100181988
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
100181988
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
100181988
Cilium and associated proteins [BR:
cin03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
100181988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CCCAP
CENP-F_leu_zip
CC_Bre1
PDCD10_N
Phage_Gp168
Motif
Other DBs
NCBI-GeneID:
100181988
NCBI-ProteinID:
XP_002120666
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All DBs
Position
2:1186663..1189037
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AA seq
576 aa
AA seq
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MASKTQLNDNQQHSSQHSNEELFQLIAHQTQYIDQLEKENEIIVTELENFKEQLVQVVNE
NQSIHDAMQAKVVEETLQQSTTMRNDPNLFKDDHTAKNLNISTSNAKQVETQLRENMNEK
WKAELKTVEGMYAAKIAVLEARLAQHIRINTNKNITLMKNQLESQEAQETEEPDTSPMQN
FNAPVMEKLTRENDQLLKTVKDLRKAVTESQKQEAALRKDLQKSIGALEDIQLEKTQIMV
KREQLQDDLDVMKRKLEKEITCGRQSITEAVAKQRDRSKDEIEKLQAQIGEAENACSQFE
VLVETMRKEKLELELKLEESRGQIMRMDKELATMRAEVEVEIKSALKGHNATDSQLRNNQ
ARLQNDMFKVSEERSELEQKVVDLNRRLRDAESHSLNLQELNLSLTQQLNEITSKHRSSE
SYSRQLEEKYIKHLQELTEDHQDKTEQLTTTLEGTQLEYEQRLSDLEAISSKQAKLLLKL
REECKNLEDGLQNMSEKYRTDMGRVSQENEQMFAKVQRLSTANKELSAQCVKHGLTHRAM
RQRLDELNVRAHRSTGQVLNLLDQQLTNSTNNYINT
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaacacaattgaatgacaatcaacaacattcatcacagcatagcaacgaa
gagctgtttcaactaatagctcaccaaactcaatatattgatcaacttgaaaaagaaaac
gaaataattgttactgagttagaaaatttcaaagaacaattggtccaggttgtgaatgag
aatcagtcaatacatgatgcaatgcaagcaaaggttgtagaagagactcttcagcagtca
acaacaatgcgaaatgacccaaacctatttaaagatgatcatactgctaaaaatctaaat
atttcaacgtcaaatgcaaaacaagttgaaactcagttgcgagaaaatatgaatgaaaaa
tggaaagctgagttaaagactgttgaaggtatgtatgcagcgaaaatagctgttctggaa
gccagactagctcagcatataagaattaatacaaacaaaaacattacattgatgaaaaat
caactggaaagccaagaggcacaagaaactgaagaaccagatacatctcctatgcagaac
tttaatgcacctgtaatggaaaagctgaccagagaaaatgatcaactattgaaaacggta
aaagacttaaggaaagctgttacagaatcacaaaaacaggaagctgcactaagaaaagat
ctccagaagagtattggagcactggaagacattcagctggaaaagacacaaataatggtg
aaaagagagcaactacaagatgacttggatgtcatgaaaagaaaactggaaaaagagata
acatgtgggcgacaatctataacagaagctgtggcaaagcaacgggataggagtaaagat
gaaatagaaaaactccaagcacagattggtgaagctgaaaatgcatgttcacagttcgaa
gttttggtagaaaccatgcgtaaagaaaaattggaattagagttgaagttggaggaatca
aggggtcaaattatgagaatggacaaagaattggcaacgatgcgagccgaagtagaagtg
gaaataaaatctgcacttaagggtcacaatgctactgatagccaattaaggaataaccaa
gcaaggctgcagaatgatatgtttaaagttagtgaagaacgatcagaattggaacaaaag
gttgttgatttgaaccgtcgacttcgagatgcagaaagtcattctttaaacttgcaggag
ttgaatttaagtcttactcaacaactaaatgaaatcacttcgaaacataggtcctctgaa
tcttattccagacagcttgaagaaaaatacataaaacacttgcaggaacttacagaagat
catcaagataagacagagcagttgactactacactggagggaacacagttggaatatgag
cagagattgagtgatttagaagctatcagctccaagcaagcaaagttgcttctaaagcta
agagaagaatgtaaaaacttggaagatggtttacaaaatatgtcagaaaaataccgaaca
gacatgggaagagtgtctcaagagaatgagcaaatgtttgctaaagtgcagagactttcc
acagcaaataaagagttgtcggcacaatgtgtcaagcatgggttaacgcacagagccatg
cgacaaagattagatgaacttaatgttcgagctcatcgatcgactggacaagttcttaat
ctgctggaccaacagttaaccaactcaaccaataattacattaatacttaa
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