Ciona intestinalis (yellow sea squirt): 100182011
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Entry
100182011 CDS
T01056
Name
(RefSeq) solute carrier family 52, riboflavin transporter, member 3-B
KO
K14620
riboflavin transporter 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100182011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100182011
Transporters [BR:
cin02000
]
Solute carrier family (SLC)
SLC52: Riboflavin transporter
100182011
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Gene cluster
GFIT
Motif
Pfam:
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
100182011
NCBI-ProteinID:
XP_002122371
Ensembl:
ENSCING00000025136
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All DBs
Position
8:6366281..6369751
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AA seq
485 aa
AA seq
DB search
MEGSWWNSSKTLMQILVLIFGAGAWIAVNGVWVELPAIVALAPEQWQLPSYLTVISQIGN
LGPLIVTLMQAMCSKYFNQNAMIYSIVSIGTLSCLLLCFFWNHTAVIAGKEYSVALFALW
YALAFVDCTSSVTFLPFMNRFQSVFLTTYFIGEGLSGFMPSIFALAQGIGNTRCLNVSSY
NETTNTTTYHIQTHYESPRFSESVFFALLCIMMALCGIAFFLLNHTKVATHFRTQEQTYK
QGSIVDTSEYPTASQTINDTYDSLEMVDSDSSGRNKSEYQQQTSFKKETNEQNFDASDAA
LVAEEPPTLTKYDYVYFLVIIFIINSLSNGVLPSVSSYTSLPYGELAYHLAATLGNMANP
VACLIAMFFPMTSRLLLGILATWACGFGSYLMVLAKGSPCPILINEPSGAVLMVLSQILF
VGLVSYIKVSIAQVFRLRGSRKSLVWYGAAIQAGSMTGALLIFPFVNVPHLMSFVSGDPC
LTVCA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagttggtggaatagctctaagactctcatgcaaatacttgtccttatattt
ggagctggtgcatggatagcagtcaatggagtttgggttgaattacccgcaattgtagct
ttagctcccgaacaatggcagttgccgtcctacttaaccgtcatctcacaaattgggaac
ttaggaccacttatagtcactttaatgcaggcaatgtgttcaaagtatttcaaccagaat
gcgatgatatacagtattgtgtccattggtactttgtcatgtttgttgctctgtttcttt
tggaaccacacggctgttattgcaggaaaagagtatagcgtggccttgtttgctttatgg
tatgctcttgcgttcgtggattgcacttcttcagttacattcctaccgttcatgaatcga
ttccagagcgtgtttttgacgacttatttcatcggggagggtttaagtggattcatgccc
agtatattcgcccttgcacaaggaattgggaacacacggtgtttaaacgtgtcctcgtat
aatgaaactactaacacaacaacctatcatatccaaactcattatgaaagccctagattt
tctgaatctgtgttctttgctctcctatgcattatgatggctttatgcgggattgcattt
ttcctgctgaaccacaccaaagttgccacccatttccgcacacaagaacaaacttacaag
caagggagtatagtcgatacttctgaatatccaactgcatcacaaaccataaacgacaca
tatgactcgttagaaatggtagattctgactcgagcggtcgcaataaatcagaataccaa
cagcaaacatcatttaaaaaggaaaccaatgaacaaaattttgacgcttctgatgcagct
ttagtagcagaagaacccccaacccttacaaaatatgactacgtttactttctggtcatt
attttcattataaatagtttatccaatggagttctaccatctgtgtcttcttatacttca
cttccttatggggaacttgcttaccatttagcagcaactctaggaaacatggccaaccct
gtggcgtgtctcattgccatgtttttccccatgacttcacgattacttcttgggatactg
gcaacatgggcttgcgggttcggaagttacttgatggtcctagcaaaaggaagtccgtgc
cctatacttatcaatgaaccaagtggggcggtcttaatggttttgtcccaaattctattt
gttggtcttgtttcttacatcaaagtttcaatcgcgcaagtgttcagacttcgaggcagt
cgtaagtcattagtgtggtatggtgcagctatacaagcggggtccatgactggagcattg
ctaatatttccctttgtgaatgttcctcaccttatgagctttgtgtctggtgacccatgt
ctcactgtgtgtgcttaa
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