Ciona intestinalis (yellow sea squirt): 100182013
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Entry
100182013 CDS
T01056
Name
(RefSeq) fibronectin isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
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GFIT
Motif
Pfam:
fn3
Pur_ac_phosph_N
Fn3_Dep-1_2nd
Galaxin_repeat
GBD_IRG7_N
Ig_ILCR1
Y_Y_Y
DUF928
Gp77
Fn3_arc
Motif
Other DBs
NCBI-GeneID:
100182013
NCBI-ProteinID:
XP_002129295
Ensembl:
ENSCING00000014059
UniProt:
F6QP88
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Position
12:complement(5091901..5099479)
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AA seq
653 aa
AA seq
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MFTLRITFLGLLVALVAGKQLPRPIRPRVTIRTTDTLKVEWTKPPLVAYARYTVTISPNG
IIHQPQSPMVTNRVITGLLPGVEYSVEVRGQSENGALSPPMTFKAWTAPLAPVQLKLRPI
TEIKIEIQLGEFEETYSVATVGIHVDWEQPDGFTDITGYDIQINPQEGVLVFPQSNIIGE
SGSTSAVYTGLTPGKQYTVTVRAKTGSEREEIFSELVTATAKIPPNRPFSVEAKDVEATD
FSLHVMRPAGANETISIHTTPNDVTISAPTPDPLLPKFDVYHISGLQPSTTYRVDVNTIS
HGVSSIEPYIVTLTTKSLPPTELHVTTFDSNSVTLQWKQPRQQLTGNQEIQYLIEYADHT
DEYLSQTINAEHSSSFINARIQELESGKVYKFNVTTIVNGIESNPAQVIQATVPPTPVVA
SIAQIGDGISLTFIEPEDGECPVVKVMYSPGLNGNNPKPVYVNISSTAFLEGVPRSSGYS
IHTRCVAAAIEGPELTFPASTVVYEDTAEGLEETARDEPPAPPPPGEGANARDAPPPPPP
PGEGANARDAPPPPPPPGEGANSRDEQGGSTAMVRLECLALGLGTGRPRPAEFIAPDACC
GNRPYHTISHTCCGRFLLGKVDDRRLCCGQTPYVTGSQKCCSPDVVVRSDVDC
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgctgaggataactttccttgggttgctggtcgcattagttgctgggaaacag
ttacctcggccgattcgcccaagagttaccatacgaacaactgacacattgaaggtcgaa
tggaccaaaccaccgcttgtagcttacgcaagatacacggttacgatttctcccaacggt
ataatccaccaaccgcaatcgccgatggtaacgaaccgagtaataaccgggttgttaccc
ggagtcgagtactcggttgaggttcggggacaatctgaaaacggagctttatcacctccg
atgacgtttaaagcgtggactgcgccactagcgcccgtccagttgaagctacgaccgatc
actgagatcaagatcgagattcaacttggagagtttgaggagacgtattcagtagctacg
gtgggaattcacgtagattgggagcaaccagatggatttacagatattaccggctacgat
attcagatcaaccctcaagaaggagttttagttttcccacagtctaacataattggggaa
agtggatccactagcgctgtatacactggtttaacacccggtaaacaatacaccgtgacc
gtccgcgcgaaaaccggttcagagagagaagaaatattcagtgaactcgttacagctaca
gcaaaaataccaccgaaccgacccttcagcgtcgaagcaaaagacgtggaagcgaccgat
ttctccctacatgtaatgaggccggcaggagcgaatgaaacaatttccatacacacgaca
cctaacgacgtaaccatcagcgcgccaactccagatcctttactgccaaagtttgacgtt
tatcatatatcaggacttcaaccttctaccacatacagagtagacgtgaacacaatatca
catggcgtttctagcattgagccctacattgttacacttacaactaaatccttaccacca
actgagctacacgttacaactttcgattcgaactccgtaacattacaatggaagcaacca
cgtcaacaactaacagggaatcaagaaatacaatatctcatcgaatatgccgatcacaca
gacgaatacttgtcacaaacgataaacgcagaacattcatcttcattcatcaacgctcgt
attcaagagttagaatctgggaaggtctataagttcaacgttacaacaatagtaaacgga
atagagagcaaccctgcacaggttatacaagcaacagtcccccccacccctgttgtggcg
tccattgctcaaattggtgatggaatttctttaacgtttattgaacccgaagacggggaa
tgtcctgtagttaaagtaatgtacagcccaggactgaacggcaacaatccgaagccagtt
tacgtcaatatatcaagtactgcattcttggaaggcgtaccaagaagttcaggttattca
atccacacaagatgtgtggcagcggccatagaaggtcctgaactaacattcccagctagc
actgtggtgtatgaagatacagcagagggccttgaagagacagctagagatgaaccccca
gcccctcctcctccgggtgaaggcgcaaatgcaagagatgcacctccaccccctcctcct
ccgggtgaaggcgcaaatgcaagagatgcacctccaccccctcctcctccgggtgaaggc
gcaaattcaagagatgaacaaggcggatcaaccgccatggtgcgattggaatgtttagca
ttaggtctcggtactggaaggccaagaccagcggaattcatcgcaccagacgcttgttgc
ggcaatcgaccttaccacaccatcagccatacttgctgtggaaggttccttcttgggaaa
gtcgacgaccgaagattgtgctgtggccaaacaccatacgttactggatcccaaaaatgc
tgttctcctgatgttgtcgttcgtagtgacgtggactgttaa
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