Ciona intestinalis (yellow sea squirt): 100182016
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Entry
100182016 CDS
T01056
Name
(RefSeq) ATP-binding cassette sub-family D member 2-like isoform X1
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin02010
ABC transporters
cin04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100182016
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100182016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cin02000
]
100182016
Enzymes [BR:
cin01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
100182016
Transporters [BR:
cin02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
100182016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
AAA_21
Mg_chelatase
SMC_N
Rad17
AAA_29
ORC-CDC6-like
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
100182016
NCBI-ProteinID:
XP_018673195
Ensembl:
ENSCING00000007200
LinkDB
All DBs
Position
2:6521134..6531679
Genome browser
AA seq
739 aa
AA seq
DB search
MSRMLLIQKSAELIDIASKHKPFIKKAAAVSTVLAGARFIYWYRQKQKNALKKEVATSTP
NKSKKDTVAVNRVFFKRLWQLMKILIPSVWSKEFVWLFLHSSALVSRTFLSIIVADLDGR
MVRSIVKTDLRQFILDLLKWLGLAIPATFTNSAIRFCESKQALAFRTKLVEKAYHLYFKN
QTYYRMGNMDGRIVNADQSLTEDIHDFTSTVAHLYSHLTKPILDIVLITNTLVNRSRERG
ANHKLPGLISFTTTFITVNVLRAVSPKFGQLIAERAARKGYLRYIHSRIIQNAEEIAFYG
GEKAELSLLHKCYRSLVKQTNLIYLQRLWYVMIEQFFMKYMWSSAGMVMIAIPILTAKGY
AENSSEEVMREWENKPEHEMISIRTEAFTSSRNLLTTSADALERVISSYKEITELAGYTE
RVWNMFEVFDQVSQGNYERSSEPNGNCGPVVLEINGDVEETDRDIILANVPIITPNGDVV
VRSLDLNLSGGMHLLITGPNGCGKSSLFRILSGLWPVYSGCLKKPPPSSMFYIPQRPYMA
IGTLRGQVIYPDTHEDMVAKGMTDDDLRKILETVHLYHVVRREGGWNTEADWKDVLSGGE
KQRMGMARLFYHRPVYALLDECTSAVSIDVEGKIFQAAKDAGIILMSISHRPSLWKYHTH
ILQFDGEGGWTFSELDSDTRYTLNEEKQNLEAHLAGVPKMQRRLNELCAILGEGSIHKLE
INGENGSDESFQIEDTPLE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtatgctgcttatacaaaaatcggccgaattaattgacatagcatcaaagcat
aaaccgtttatcaaaaaagcagcagctgtttcaactgttctggcaggagcacggtttatt
tattggtaccgccaaaaacaaaagaatgcattaaagaaagaagttgccacatcaacccct
aacaaatcaaagaaagatacagttgcagtgaatcgagtttttttcaaacgattatggcaa
ttgatgaagattctgattccaagtgtttggagcaaagagtttgtttggctcttccttcat
tcatctgctcttgtatcgagaactttcctttcgatcattgtcgcagatttagacggaaga
atggtgcgctctattgtgaagacggatttgcgacagtttatacttgatttgcttaaatgg
cttggacttgccattcctgctactttcacaaacagtgcaatcagattctgtgaaagcaaa
caagctttggccttcagaaccaaactagtagagaaggcttatcatctgtatttcaaaaac
caaacttactacagaatgggtaacatggacggaagaattgtgaatgctgaccaaagttta
acggaagatatacatgactttacctcaactgtggctcatttatattcacatctcactaaa
cctatacttgatattgtgctcatcacaaatacactggttaaccgctcaagggaaagaggg
gcaaaccacaaattacctggtttaatctctttcacaactacattcatcacagtcaacgtt
ctacgagccgtgtccccaaagtttggccaacttatcgctgagcgagcagcaaggaaagga
tatcttcgttacattcattcaaggataattcagaatgctgaggaaattgcattctatgga
ggggagaaggccgaattaagcttgctgcataaatgctatcgatctttggttaaacaaacc
aacctaatctacctacaacgcctatggtatgttatgattgagcagttcttcatgaaatac
atgtggagtagtgcaggcatggtcatgattgctattcctattcttacagcaaaaggttac
gcagaaaactcatcagaagaagtgatgcgtgaatgggagaacaaaccggagcacgagatg
atcagcatccgcactgaagccttcacaagctcccgtaatctcctcacaacatctgctgat
gctcttgagagagtcatcagttcgtataaagagatcactgaacttgccggatacactgaa
agggtttggaatatgtttgaggtgtttgaccaagttagtcaaggcaattatgaaagatca
agtgaaccaaatggtaactgtggacctgttgtattggaaattaatggtgacgtggaggaa
acagaccgtgacatcatactcgcaaacgttcctataatcacccctaatggtgatgttgtt
gttaggagcctagatcttaatttatccgggggtatgcatctgttgattactggtcctaat
ggttgtggaaaaagttcattgtttcgaatcttgagcgggttatggccggtttattccggt
tgtcttaagaaaccaccaccctccagtatgttctacattccacaaagaccatacatggcg
atcggaacgttgcgtggtcaagttatttacccggacacacatgaggacatggtggctaag
gggatgactgatgatgatcttcggaagatcctggaaaccgttcatctttaccacgttgtg
aggagagagggaggatggaacacggaggcggattggaaagatgttttatctggaggagag
aagcagaggatggggatggcaagattgttttatcatagacctgtgtatgcgttgttggat
gaatgtacttctgctgtcagtattgatgttgaaggaaagatattccaagcagcgaaagat
gccgggattatattaatgtctatatctcataggccttctttatggaagtatcacacccac
atcctccagtttgatggtgagggtggttggaccttcagtgagttggattcagatacaaga
tatacgttgaatgaagaaaaacagaacctggaagctcacctggcaggggttccgaagatg
cagcgaagattaaacgaactttgcgcgattcttggtgaaggttcaattcataaacttgaa
ataaatggtgagaatggatccgacgaaagttttcaaattgaagacacgccactggagtaa
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