Ciona intestinalis (yellow sea squirt): 100182083
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Entry
100182083 CDS
T01056
Name
(RefSeq) mannose-binding protein A-like
KO
K03991
mannose-binding lectin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100182083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100182083
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
cin04091
]
100182083
Membrane trafficking [BR:
cin04131
]
Endocytosis
Phagocytosis
Opsonins
100182083
Lectins [BR:
cin04091
]
C-Type lectins
Group 3: Collectins
100182083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
BPL_LplA_LipB
DUF5030
XhlA
Motif
Other DBs
NCBI-GeneID:
100182083
NCBI-ProteinID:
XP_002129962
Ensembl:
ENSCING00000002334
UniProt:
F6PNN6
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All DBs
Position
7:3743726..3745760
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AA seq
236 aa
AA seq
DB search
MFSFKVCVVFIIGLHAAVYAGDNIYLTCSESGPPLEGNQGPPGPAGPAGPKGPKGDTGVT
TELEHTVHNLEKRLQKAERDIVVMTKTINEINSHTCQCMEVIDGKVWYGPGNGYLYLIIV
SDMTYDEARSKCSKYGATLAVHGPKNRDVMKILHKQLPVTTQEDYWIGLTDKQSEGRFVW
EDGSALKSSEANWYPGEPTDYEHNEDCVGGNFRDSLQWNDYKCSDGQLYALCERRE
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgttcaaagtgtgcgtcgtgttcattatcggtctccatgcagctgtgtacgcg
ggagacaacatctacttaacttgttccgagagcgggccgccattggaagggaaccagggg
ccacctgggccagcggggccggccggtcccaaagggccgaaaggggacacaggggtcact
actgagctagaacacaccgtgcataatttggaaaaaaggttgcaaaaagccgagagggat
attgtagtgatgacaaaaacgatcaacgaaattaacagtcacacttgccaatgcatggaa
gttattgatgggaaagtttggtatggacccggaaacggttacctatacctgattattgta
agcgatatgacatacgacgaagctagatcgaaatgtagcaaatacggagctacacttgca
gtgcacggacccaagaacagagatgttatgaaaatccttcacaaacagttgccggtaacc
acccaggaagactattggattggtcttaccgataaacagagtgaaggcagatttgtgtgg
gaggatggctcggcactgaaaagcagcgaagcgaattggtatcctggtgaaccgaccgac
tatgaacataatgaagattgtgtcggtggcaatttcagagacagtcttcaatggaatgac
tacaagtgctcagacggacagttatacgcgctttgcgaacgtcgagagtag
DBGET
integrated database retrieval system