Ciona intestinalis (yellow sea squirt): 100182086
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Entry
100182086 CDS
T01056
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00562
Inositol phosphate metabolism
cin01100
Metabolic pathways
cin04070
Phosphatidylinositol signaling system
cin04081
Hormone signaling
cin04082
Neuroactive ligand signaling
cin04310
Wnt signaling pathway
Module
cin_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
100182086
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100182086
04070 Phosphatidylinositol signaling system
100182086
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
100182086
04081 Hormone signaling
100182086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100182086
Enzymes [BR:
cin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
100182086
Membrane trafficking [BR:
cin04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
100182086
Endocytosis
Macropinocytosis
Phospholipase C
100182086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
PLC-beta_C
EF-hand_like
Motif
Other DBs
NCBI-GeneID:
100182086
NCBI-ProteinID:
XP_026689975
LinkDB
All DBs
Position
4:complement(1101122..1128164)
Genome browser
AA seq
1352 aa
AA seq
DB search
MAGAESAVHRVIVEKPSIPERLINGSKFIKWPKSDNDDSIIAVQVTLKIDPKGHIIYWQE
PGRDTECLEISSIRDTRVGKYAKEPKQEKLERSAQNSGDPQLIKMVCNSSVPVVEKCLTI
VYGVKLVELSFLNFICVELDPQQCVKEWADFLLELAYHPCTRHISVQTSIEKAYTRLKLE
TNQFGEIPVKKLIKVLGGKIKRVNHALASVGLVPGRTDVSIKPDDFHLSGFKKLLQLCCL
RPELDSVFSKLGTGARRMYVSHQKFKDFINNEQRDPKLNDLLYPFHTDDQAQDAITNFEP
NEMFATKGQLTLEGLDAYLQSDDNLIVGLDKFAEHQAMNAPLSHYFINSSHNTYLTGTQL
RSKSSAEIYRQVLLTGCRCVELDCWEGDEEPVINHGFTLCTHVLFREVIEAINESAFKTS
PYPVVLSFENHVDNPQQQAKMAQYCRDIFGDKLLIDPLSKYPIVADSSLPPPCDLKYKII
VKNKKQRPAAETNPKSPNEDSIKDKKRPSIVSESPQSPGAEFSKASRRSLHNRESSSSSL
STEKSSRPSSRTESANRKQTVASRVSATVDEVAETEEEEEKVNGSEVIQGEDTKKSSSSS
IGSTDASQEKSDSNENSDKTNSGGEESKSSENSVEQENSEENGEDGEKTEKTSNAKETKD
EDEDSEDEGSITTLDYEENAKECGTAMKESKAYEAMSSLVNYVQPVRFKSFELSERRKRC
YEISSFTESAALRLLTFYPMEFVRYNRRQMSRIYPKGARVDSSNYMPQIFWNAGCQFVAL
NFQILDLAMQLNMGLFEFNGSSGYILKPLPMRNKDKTFDPFSKNLDGVVATSLKIQIISG
QFLSSSKVSTYVEVDMYGLPADTIRKRLKTKVVESNSLNPCYNSEVFTFNKIVLPCIAIL
RIAVMETNGSMLGQRFLPVDALKPGYRYITLRNEGNQPLTMPSLFVHLEVADFVPEVHLK
FMEALANPIPFMKEKDREEQEMKNRQKALQLLLEEDEKEKVEDKPLDSDNESEKPKPASD
KKEKKPTVETTTKDGDSIPLPKPVKASKSKQEKNEVLLEVFEPQNLNDLRLNEGYLKIIK
ESEKGINKLKKKHKKTFSKCHGQLFPARSPSLLNLFFTRRRLSAADVTIDVNPAMPDEIK
KKEMFKLLEEQFDAEKTYQIEQTDNFVRKLESFVRDHQKVEMERLTKTSAKEQAALQRQK
DAEKEQNIRAIPVNLGKDEIERKKREINSSHIEECVRIRGSLLLKQEEREKEVLCQQEEI
LASVEDERKKMLEKIEQDYQESMRNVEGVYEIRKLELNQKNGAVSAYNDTADALQNRTEL
LTVPPVFDPSRRASGGQLLITGKPALLEQVAN
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atggctggagctgaatctgctgtacacagagttattgtcgaaaagccaagtattccagaa
agattaatcaatggaagcaaatttattaaatggcccaagtcagacaatgatgattccatc
attgctgtgcaggttacgttaaaaattgatccgaaaggtcacatcatatactggcaagaa
cctggaagggataccgaatgtttagaaatttcaagcataagggatactagggttgggaag
tatgcaaaggaaccaaagcaagaaaagcttgaaagatcggctcaaaatagtggggatcca
caactcattaagatggtatgcaactcatcagttccggtggttgagaaatgtctcacgatc
gtgtacggtgtcaagctggttgagctttcctttctaaacttcatctgtgttgaactagat
ccccaacaatgtgtcaaggaatgggccgattttcttttggagcttgcttatcatccatgt
acacgacatatatcagtgcaaacatctatagagaaagcgtacacccggttaaaactagaa
acaaatcagtttggggaaattcctgtgaaaaaattgataaaagtactaggtggtaaaata
aagagagtgaaccatgcattggcatcagtgggacttgtacctggcaggactgatgtttca
attaaaccagacgactttcatttatctggatttaaaaagttgctccagttatgttgtctt
cgaccagagttggactcggtgttttcaaaattaggtacaggtgcaagaagaatgtatgta
tcgcaccaaaagtttaaggacttcattaacaatgaacagagggatccaaaattaaatgat
ttgctttacccgtttcatacggatgaccaagcacaggatgcaatcactaactttgaacca
aatgaaatgtttgctaccaaaggtcagttaacattggaaggtctggacgcttatcttcaa
tccgatgacaaccttattgttggtttggataaatttgctgaacatcaagcaatgaatgca
cctctgtctcattacttcatcaattcttcacataatacatatctaaccggtactcaatta
agaagcaaatcatcagccgaaatatatcggcaagttttgctcactggatgtcgctgtgtg
gagttggattgttgggagggggacgaggagcccgtgatcaaccatggatttactctttgt
actcacgtcctcttccgtgaagtaattgaagcaatcaatgaaagtgcgttcaaaacttca
ccttaccctgtggttctatcatttgagaatcatgttgacaatccacaacagcaagcaaag
atggcacaatattgtcgcgatatatttggggataaattactgattgacccgcttagcaag
tatcctattgttgcagactcaagtctacctccaccttgtgacctaaaatacaaaattatc
gtgaaaaacaagaaacaacgtccggctgctgaaaccaatccaaaatcaccaaatgaggac
agcattaaagataaaaaacgaccgtcaattgtttccgaatctccacaatctcctggggct
gagttctccaaagcatctcgtcgtagtttacacaacagagaaagctcttcaagctccctg
agtacagagaagtcctcacgaccgagttcacgaacagaatcagcgaatcggaaacaaaca
gttgcatcccgtgtgtccgcaactgtggatgaggtggcggagactgaagaagaagaagag
aaggttaatggatcagaagtcatccagggagaggacacaaaaaagtcctcttcatcttca
attggttcaactgatgcttcacaagaaaaatccgacagcaatgaaaattctgataaaacg
aactcaggtggcgaagaatcaaaaagcagcgaaaattctgttgagcaagaaaacagtgaa
gaaaatggagaggatggtgaaaagactgagaaaactagcaacgctaaggaaactaaagat
gaagacgaggacagtgaggatgaaggcagcatcacgacacttgattatgaggagaatgct
aaggagtgcggaactgcaatgaaagaatcaaaagcttacgaagctatgtcatcgttagtc
aactatgttcaacctgttaggttcaaatcatttgaattatctgaacgaagaaagcgatgt
tatgaaatttcttcattcactgagtctgctgctctgcgtcttcttaccttctacccgatg
gaatttgtgcgttacaatcgtcggcagatgagcaggatctaccccaagggagctcgtgta
gattcatcaaactatatgccacagatattctggaacgctggttgtcagtttgtggcactt
aacttccaaattttggatcttgccatgcaactaaacatgggcttatttgagtttaatggt
tcatctggttatattcttaaacctctccccatgagaaataaagacaaaacttttgacccg
ttttccaagaacttggatggtgttgtagctacaagtctaaaaattcaaattatatctggt
cagtttctttcctcttcaaaagtaagcacctacgtagaagtggacatgtatggcttacct
gccgatacaataagaaaacgattaaagacaaaagttgtcgaaagcaactccctcaaccca
tgttacaatagtgaggtgtttacattcaacaagatcgtgcttccatgtattgctatacta
cgcatagcagtaatggaaactaatggaagtatgttgggtcaacgattcctgcctgttgat
gcacttaaacctggttacagatacatcacacttcgtaatgagggcaaccaaccactaacc
atgccatctttattcgttcatcttgaagttgctgactttgtccctgaagtgcatttaaaa
tttatggaagcactcgcaaacccgatcccatttatgaaagagaaagatagagaggaacaa
gagatgaagaatcggcagaaagctctccaacttctcttggaggaggatgagaaagagaaa
gttgaagacaaacctttagattccgataatgagagtgaaaaacccaaaccagcttcagat
aaaaaagagaaaaaaccaacagtagaaacaactactaaggatggagattcgattccttta
cctaaaccagtaaaggcaagcaagtcaaaacaggagaagaatgaagttttattggaagta
tttgagccacaaaacttgaatgacttgcgtctgaatgaaggttacttgaaaatcatcaaa
gaaagtgagaagggaataaataagttgaaaaagaaacataaaaagacattttcaaaatgt
cacggccagctctttccagcacgaagcccatctttactcaacttattctttacaagaaga
cgactatctgctgcagatgttacaattgacgtcaaccctgcaatgcccgatgaaataaaa
aagaaagaaatgtttaagttacttgaagaacaatttgatgcagaaaaaacctaccagatt
gaacaaacagataattttgttagaaaattggaaagttttgttcgtgaccaccagaaagta
gagatggaaagattaactaaaacatctgcaaaagagcaagcagctcttcaaaggcagaaa
gatgcggagaaagagcaaaacatccgagccatccctgtcaaccttggtaaagatgaaatt
gagaggaagaagagagagatcaactctagtcatatcgaggagtgtgtccgcatccgtgga
tcattgttattaaaacaagaagaacgtgaaaaggaggttctttgtcaacaagaagaaatc
ttagccagtgttgaagatgaaagaaaaaagatgctggagaaaattgagcaggattaccag
gagagcatgagaaatgttgagggggtttacgaaatccgcaaattggagctcaaccagaag
aatggtgcagtgagcgcctacaatgatacggcagacgccctccaaaacaggacagagctg
cttaccgttcccccagtattcgatccaagtagacgggcgtctggtggtcaacttctcatt
actggtaaaccagcgctgttagaacaggttgctaattga
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