Ciona intestinalis (yellow sea squirt): 100182144
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Entry
100182144 CDS
T01056
Name
(RefSeq) elongator complex protein 3
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cin03016
]
100182144
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
100182144
Transfer RNA biogenesis [BR:
cin03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
100182144
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ELP3_N
Radical_SAM_C
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
FR47
Motif
Other DBs
NCBI-GeneID:
100182144
NCBI-ProteinID:
XP_002131669
Ensembl:
ENSCING00000005659
LinkDB
All DBs
Position
8
Genome browser
AA seq
548 aa
AA seq
DB search
MGKATEPTASQAELLAISTAEIVRVLIDAHDSGQDINLNKLKGRISSKHGLKSQPRLTDI
IAAVPHQYKKSLLPKLRAKPVRTASGIAIVAVMCKPHRCPHINMTGNICVYCPGGPDSDF
EYSTQSYTGYEPTSMRAIRARYDPFLQTRHRVEQLKQLGHSVDKVEFIVMGGTFMSLPDT
YKDYFIRNLHDALSGHRSNNVEEAVKYSERSRTKCIGITIETRPDYCLKKHQSEMLTYGC
TRLEIGVQSVYEDVARDTNRGHTVRAVSESFQIAKDCGFKVVTHMMPNLPNVRLERDIEQ
FVEFFENPAFRPDGLKIYPTLVIRGTGLYELWKTGRYQSYPPSTLIDLVAKILALVPPWT
RIYRVQRDIPMPLVSSGVEHGNLRELALARMKDLGTTCRDVRTREAGIQQIHHKVKPYEV
ELIRRDYTANGGWETFLSYEDPEQDILVGLLRLRKCSQEAFRPELKGKGASLVRELHVYG
SVVPVSSRDPAKFQHQGFGTLLMEEAERIALEEHGSSKLVVISGVGTRNYYRKLGYELDG
PYMSKNLI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggcaacggagccaacagcttcccaagctgaactgcttgcaatttctactgct
gaaattgtgcgtgttttaattgatgcccatgactcggggcaagacattaatttaaacaaa
ctgaaaggaagaatttcatcgaaacatggcttgaaatctcaaccaagacttacagacatt
atagcggctgttccacaccagtataagaagtcacttctacccaaactgagggcaaaacct
gtcagaactgccagtgggatagcaattgtggctgttatgtgcaaacctcatagatgccca
catataaacatgaccggtaacatttgtgtgtattgtccaggaggtccagactctgacttt
gagtattcaacacagtcttacacaggatatgaacccacttctatgagagcaatacgtgcc
cgttatgacccatttttacaaaccaggcacagagttgagcaactgaaacagcttgggcat
tcagtggataaagtcgagtttatagtcatggggggaactttcatgtcattacctgataca
tataaagactactttataaggaatctgcacgatgccctctcaggccacaggagtaataat
gtagaggaagctgttaaatacagcgagagaagccgcacaaaatgcattggtataaccatc
gaaacaaggccagattactgcctcaaaaaacaccaaagtgaaatgttaacatacgggtgt
acgagacttgaaattggtgttcaaagtgtgtacgaggatgtagcacgtgacactaacaga
ggacacacagttcgtgctgtatcagagtcatttcaaattgcgaaagattgtggtttcaaa
gttgtcacccacatgatgccaaacctgcctaatgttcgcttagaaagagacattgaacaa
tttgttgagtttttcgaaaacccagcctttcgacctgatggtcttaaaatatatccaacg
ttagtaattcgtggaacaggtttgtatgagttgtggaaaactggtcgataccagagttat
ccgccttctacattgattgatttggttgctaagattcttgctcttgttcccccatggaca
agaatttacagagtacaaagagatatcccaatgccactggtatcatctggagtagaacat
ggtaacttaagggaattggctcttgcaagaatgaaagatctcggcaccacatgcagggat
gttcgtactagagaggccgggatacaacaaatacatcataaagtgaaaccatacgaagtt
gaactgataagaagggactacacagcaaatggtggctgggaaacatttctttcatatgaa
gacccagagcaagatattttagtcgggcttttgagactcagaaaatgttcacaagaagct
tttcggcctgaattgaaaggcaagggtgcgtccttggtacgcgaactgcatgtttatggt
agtgtggttcctgtgagttctagggatcctgctaagtttcaacatcaagggtttgggact
ttgctgatggaggaagcagagcgtatcgctcttgaggaacatggatcgtctaaacttgtc
gttatctcaggagtgggcacgaggaactattacaggaaacttggttatgagttggatggt
ccatacatgtcaaagaacttgatataa
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