Ciona intestinalis (yellow sea squirt): 100182145
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Entry
100182145 CDS
T01056
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
cin04517
IgSF CAM signaling
cin05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100182145
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100182145
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
100182145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100182145
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100182145
Membrane trafficking [BR:
cin04131
]
Others
Actin-binding proteins
Arp2/3 complex
100182145
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
100182145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR5
ANAPC4_WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Rax2
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
100182145
NCBI-ProteinID:
XP_002130183
Ensembl:
ENSCING00000004481
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MCSTFWLYFLNSPSQSDFIVASFVERSYCCCCFVRVDCPESTNFLFIHSVVKMGEVFNFG
VHPISCHSWNHDRTQIALSPNSNDVLIYKKSGKKWDHIHTLSEHTLKVTDIDWAPKTNRI
VTCGADRNAYVWQLTNGEWVQELVILRINRAATYVRWSPQEDKFAVGSSSRMISVCYFES
DNNWWVSKHIKKPIRSTIVSLDWHPNNILLAAGCCDYKAYVFSAYIKEINPKPGPTVWGK
KMTFGCLMQEFVMPCTGWVHGIAFSNSGDCLAMVSHGSVLSVAKGGGELTSIRTEFLPFN
DCVWFGENSIIAGGHDCNPVLFKVEGDCSKVAFANKLDQPPKGGGGGKAVSAMNMFKMMD
KKGTVEATSTDLTTKHKNAIIQVCVYGPHQFSTCGKDGNVVVWDNKSLEASIAGLRIN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctacgttttggttgtatttccttaattccccatctcaatcagattttattgtc
gccagtttcgttgaaagaagttattgttgttgttgttttgttcgtgtagactgtccagag
tccacgaactttttattcatacattccgttgtaaaaatgggtgaagtttttaactttggg
gttcaccccattagttgtcattcatggaatcatgaccgcacgcaaattgctttgagtcca
aacagcaacgatgttttgatttacaagaaatccgggaagaaatgggatcatattcataca
ttaagcgaacatacacttaaagttacagacatcgattgggccccgaagacgaaccgtatt
gttacgtgcggtgccgacagaaacgcctatgtttggcaacttactaacggggaatgggtg
caagaattggtgattcttcgtattaatcgagcagcgacgtacgtacgatggtcgccacag
gaagataagtttgctgtcggaagttcatcacgcatgatttccgtttgctactttgagtcc
gataataattggtgggtgagcaaacatatcaagaaacctatcagatccaccattgtttcg
ttggattggcatccgaacaacattttactcgcggctggttgttgcgattacaaagcttac
gtgttctcggcttacatcaaagaaatcaatccaaaacctggtcctacagtttgggggaag
aagatgacgtttggatgtttgatgcaggagtttgtgatgccttgtactggatgggttcac
ggaatcgcattttcaaactctggcgattgtttagcgatggtgtcccacggcagtgtgctc
tctgtcgccaaaggtggtggagaattaacatcaatcaggacggagtttcttccatttaac
gattgtgtttggtttggggagaacagcataattgcagggggccacgattgcaaccctgtg
ctgttcaaagttgaaggggattgttcaaaagttgcgttcgccaacaaacttgatcaaccc
cctaaaggagggggtgggggaaaagctgtgtcggccatgaatatgtttaagatgatggat
aagaaaggaaccgtagaggcgacttccactgatcttactacaaagcataagaacgcaatc
atacaggtatgcgtgtacgggccacaccagttctcaacatgtggtaaagatggaaacgtt
gttgtttgggacaacaagtcacttgaagcatctattgctggtcttcgaattaattaa
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