Ciona intestinalis (yellow sea squirt): 100182172
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Entry
100182172 CDS
T01056
Name
(RefSeq) KH homology domain-containing protein 4-like
KO
K25780
kelch domain-containing protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
100182172
Spliceosome [BR:
cin03041
]
Complex B
Other components
Prp19-related factors
100182172
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GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Pantoate_ligase
Motif
Other DBs
NCBI-GeneID:
100182172
NCBI-ProteinID:
XP_002127162
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Position
6:2343923..2346082
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AA seq
554 aa
AA seq
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MSKDSWRQNSMPPRPDYGNFKAPSLPSANSNPAPKKTRISKFSDEPTVNSPPLNGNGGTS
EKSRVSKFSLHPPSASIPSKSDPVAAAAAAAARINANLRAKGKLSDQTQHKPVVNTIQTA
NSALSAIQVSQIKKIFDLYVAKIDINNLPIVTRTYMTQVNAQEIINKQTGAAVSTKGQYL
TQDEKKNVEGIDKQLHLYVQSPSQDKVELAINKIKDMISKHNVSKSSLSAVAPTMVPPMV
SMPIPQNMVGQPSLPSGNYVHDKLFIGMDYVPPDFDLKTKLIGANYTNFNFVANSTGAKV
ILRGRGSGFIEPTSGREAFESMYVFISHPNQAGVDAAKKLVNNLIEHVRNEYNAHTRKTQ
SGFGNPQAAYPGNPPYGSNSVNYQPPSQFPSYPMGNIPPMGNPYMNYTQAPPNPYNMPQN
ITAHPNIPPPVPVPPPTFTPPTQPPFNPQATPNITPTPQAAPTSDMMPPPPPVAVKPTEP
APKPTKRRRFKEEQPDDSNILGYQQFSKNSDQDSKKTKRNFSEKSTESLPNTTVEKDSKE
QTKSGSLPFWMSYD
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggattcttggcgacagaattcaatgccaccacgcccagattatgggaatttt
aaagcaccttcattaccgagtgcaaactccaacccagcacccaagaaaactcgcatttca
aagttttctgacgaacccacagtaaacagtccgccgttaaacggtaatggtggtacttct
gaaaaatcgagggtctcaaaattttctctccacccaccaagtgcttccattccgtcaaaa
tctgaccctgttgcagcagcggctgcagcagctgcaagaattaatgcaaaccttcgagca
aaaggcaagttatccgaccaaacacagcataaaccagtagtaaatacgatacaaacagca
aactctgcgttatctgcaattcaagtgtcccagattaaaaaaatatttgatctttatgtt
gcaaaaatcgatataaataatctaccaatagtcacacgaacttacatgactcaagtcaac
gcacaagaaatcattaacaaacaaacgggggctgctgtttccaccaaaggacaatattta
acacaagatgaaaagaaaaacgttgaaggaatagacaagcagttacatttatacgtacag
tccccttcacaagacaaagtagagcttgctatcaataaaataaaagacatgatttcaaaa
cataacgtctcaaagtcttccctaagcgcagttgccccaaccatggtcccaccaatggtc
tcaatgcccatcccacagaacatggtgggccaaccatccttaccaagtggtaactatgtc
catgacaaattatttataggaatggattacgttcccccagattttgacctgaaaacaaaa
cttatcggagcaaattacacaaactttaatttcgttgcgaactccactggagcaaaggtg
attctacgaggcagaggatctggtttcattgagccgacttctggtcgcgaggcttttgaa
tctatgtatgtattcatcagccacccaaatcaggcgggggtagatgccgctaaaaagttg
gtgaacaatcttatagagcatgtacgtaacgaatacaatgctcataccagaaaaacacag
tctggatttggaaacccacaagccgcttacccagggaacccaccatatgggtccaactcg
gtaaactaccaacccccatcccaattcccatcttaccccatgggtaatatacccccaatg
gggaacccatacatgaactacacccaagccccccctaacccttacaacatgccccagaac
attacggctcaccctaatataccccctcctgtcccagtacccccaccaaccttcaccccg
cctacccagcccccctttaacccccaagcgacccccaatataacccctaccccccaagca
gcacctacaagtgacatgatgccacctcctccccctgttgctgtaaaaccaacagaacca
gcgccgaaaccgacgaaaagacgaaggtttaaagaagaacaacctgacgattcaaacatc
ctaggctaccaacaattctctaaaaactctgaccaagattccaaaaaaacgaaaagaaac
ttttcagaaaaatcaacagaaagccttccaaatactacagtagagaaagattcaaaagaa
caaacgaaaagcggttcactaccattctggatgtcgtatgactga
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