KEGG   Ciona intestinalis (yellow sea squirt): 100182193
Entry
100182193         CDS       T01056                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04137  Mitophagy - animal
cin04144  Endocytosis
cin04145  Phagosome
cin04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100182193
   04145 Phagosome
    100182193
   04137 Mitophagy - animal
    100182193
   04148 Efferocytosis
    100182193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100182193
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100182193
   04031 GTP-binding proteins [BR:cin04031]
    100182193
Membrane trafficking [BR:cin04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100182193
 Endosome - Lysosome transport
    100182193
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100182193
  Exosomal proteins of other body fluids (saliva and urine)
   100182193
  Exosomal proteins of colorectal cancer cells
   100182193
  Exosomal proteins of melanoma cells
   100182193
GTP-binding proteins [BR:cin04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100182193
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 100182193
NCBI-ProteinID: XP_002122313
Ensembl: ENSCING00000003340
UniProt: F6S1S7
LinkDB
Position
Unknown
AA seq 217 aa
MATRTGAPRPANSGTQGKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLQDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQ
RQASPNIVIALAGNKADLSNKRMVEHDDAVSYAEENGLLFMETSAKTAMHVNDIFLAIAE
KLPKNEAGASANRQSAGVGLTATDNREGSGKSCCGSN
NT seq 654 nt   +upstreamnt  +downstreamnt
atggcaacacgaactggagcacctcggccagcgaattcaggcacacaaggaaagatctgt
caattcaaacttgtattacttggtgaatctgcagttggtaaaagtagcttggtgttgaga
tttgttaaaggacaatttcatgaataccaagaatctacaataggagctgcattcctcaca
caaacggtatgcttgcaagataccacagtaaagttcgagatctgggatacggctggtcag
gaaagataccacagtcttgcacccatgtattacagaggtgcacaagctgccattgttgtt
tatgatattactaatcaggatacatttgctcgtgctaaaacttgggtgaaagaattacaa
agacaagccagtcccaatattgtgatagctctggcaggaaacaaagctgatttatccaac
aagagaatggtagaacacgatgatgctgtaagttacgctgaagagaatggacttttgttc
atggaaacttcagccaaaactgcaatgcatgttaatgatatatttttagcaattgctgag
aaattaccaaagaatgaagctggtgcttcagccaaccgacagtcagcaggtgttggttta
acagccactgacaacagagaaggttcgggaaaatcttgctgtggctccaattga

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