KEGG   Ciona intestinalis (yellow sea squirt): 100182223
Entry
100182223         CDS       T01056                                 
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100182223
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cin01009]
    100182223
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cin03400]
    100182223
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     100182223
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     100182223
Protein phosphatases and associated proteins [BR:cin01009]
 HAD phosphatases
  Other HAD phosphatases
   100182223
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     100182223
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 HAD_PNKP Hydrolase_6 Methyltransf_36 AAA_25 AFT
Other DBs
NCBI-GeneID: 100182223
NCBI-ProteinID: XP_002127397
Ensembl: ENSCING00000006210 ENSCING00000022588
LinkDB
Position
Unknown
AA seq 547 aa
MEIYLQCCDGHHDDIFLPDGQAVVVGRSEATKITDKRCSRKQLELTADYSNKSVTVRQLG
STPGCIDGKPLDHNNIASLHENETLCVVQKEFPHKLLFVTNDNQGEETTSTLNKKRTLTD
YFVNNNVPKSKKLKKDLKEDNIEEKLKQLQQQSFSKPKTDTKPPVSTTTSQCEIGWSTVD
QSMLVYQSEGLKHSSQVVAFDLDSTLITTKSGKTFATDYKDWKIMLGEIPKKLKQLSAEG
VKIVIISNQNGISKGKVKEEDFKKKAEAVVKALGVPCQVLAATKRCKYRKPNIGSYNWLC
DYGNGGIKVDDFTYVGDAAGRAKNWEPKRKKDFSCSDRLFALNLNVPFFTPEEYFLNQKP
AKFTLPEFDPKSLKSSSKELTSVGNIVSNQQEVLILVGYPACGKSTFTRQHLVPKGYVQI
NRDTLKTWQKCVAACKSALASGKSVAIDNTNPDIESRKRYIDCAKERKCPCRCLYFDISI
EHAFHNNRFRELSGTAHDIISSMIIYSHRKKFVEPTTKEGFDEIVKVNFVPSFENKELER
MYYMYNV
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggagatttatctacaatgttgtgacggtcaccatgacgatatatttttacctgatgga
caagctgttgtggttggtcgatcagaggcaacaaaaataaccgacaaacgctgctcaaga
aagcagttggaattaacagctgattattcaaataaatcggtcactgtccgtcaacttggt
tctacaccaggatgtatagatgggaaaccactggaccataacaacatagcctcgttacat
gagaatgaaactttgtgcgtcgtgcaaaaagaatttccacataagctgctttttgttact
aatgacaatcaaggtgaagaaacaacttcaacattaaacaaaaaaagaacattgacagat
tactttgtgaataataatgttcccaaatcaaagaaactgaaaaaagatttaaaagaagat
aatattgaagaaaaattaaaacaattacaacaacaatccttcagtaaaccgaaaacggat
accaaaccaccagtttccacaacaaccagccaatgcgagattggttggtccacagtcgac
caaagtatgttggtgtatcagtcggaaggtttgaaacattcgtcacaggtcgttgcattt
gatctcgattcaactttaatcactactaaatcaggtaaaacatttgcaactgactataag
gattggaagataatgttgggggagataccgaagaaattaaaacaattgtcagcagaaggt
gtaaaaattgtcataatttcgaatcaaaacgggatttctaaaggaaaagtaaaagaagaa
gattttaagaaaaaggcagaagctgtggttaaagcattgggtgttccttgtcaggtccta
gctgccacaaagagatgtaaatatcgtaaaccaaacattgggtcttataactggctatgt
gactatggtaatggtggaataaaagttgatgattttacctacgtgggggatgcagcaggc
cgtgctaagaactgggaaccaaaaagaaagaaagattttagttgcagtgacaggctattt
gcattaaacctcaacgttccattcttcacaccagaggaatattttctcaaccagaaacct
gccaagttcacacttccagaatttgatccgaaatctttaaaaagttcgtcaaaagaactt
acttcagttggaaatattgtgagcaaccagcaagaagttttgatccttgttggttatcct
gcttgtggtaaatcaacattcacccgacaacatttggttcctaagggttatgttcagatt
aacagggacaccttgaaaacttggcagaaatgcgtggcagcttgtaagtcagctcttgca
tcaggtaaaagtgttgctattgacaacactaatcctgacattgaatccaggaaaagatat
attgactgtgctaaagaaaggaaatgtccatgccgatgtttgtattttgatatttctatt
gagcatgcatttcataacaatagatttcgtgaactaagcggtactgctcatgacatcata
tcttcaatgataatttactctcatcgtaaaaagtttgttgaaccgactaccaaggaaggt
tttgatgaaatagtcaaagttaattttgttccttcctttgaaaacaaagagcttgaacga
atgtattacatgtataatgtttga

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