Ciona intestinalis (yellow sea squirt): 100182230
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Entry
100182230 CDS
T01056
Name
(RefSeq) WD repeat-containing protein 76
KO
K24755
WD repeat-containing protein 76
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100182230
03036 Chromosome and associated proteins [BR:
cin03036
]
100182230
03400 DNA repair and recombination proteins [BR:
cin03400
]
100182230
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100182230
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
100182230
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
100182230
DSBR (double strand breaks repair)
Other DSBR factors
Others
100182230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WDR55
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
100182230
NCBI-ProteinID:
XP_026691643
Ensembl:
ENSCING00000002469
LinkDB
All DBs
Position
9:complement(4042404..4047154)
Genome browser
AA seq
550 aa
AA seq
DB search
MSEVRHSKRLLAKSNKVNVSPQKKQQTKVAKAPKTQTTTKRKNKSSDAKENIRKTPENIV
DSSQTDDSSDIDSEDEDFYQKIQNQRRKLEQEKLKIIQDLNLHQAALDLQSSLKSNSGAR
RKTEKREAGVPVRKSRRLQNIKPEDKDKEGWSASTEVSEPKAQRVTDQEHKIDPVVKETT
TKKNSDPEETNNNKESSKYTELIEIFKSELKLKFPDENLPVDSFTKKLESNTSSQCVVEK
VVQSRIYAIDIYPSHSDIIMAAGGREGDVGIWNLDTSYKGDDKASIFSFFPHSSPVKCLR
FAPDAPHKLYSCSYDGMFRCTDLTSETVSKAIHDDETYPPMYFDFIGKTSQSFILAKYGG
DVMLCDTRESEDKFKTYGTGMRSLRGVSVHPVDSHYFAVSGNDKTLGSALIFDMRKLLRK
ASHPVVTLHGHKKAANSAIFSPITGNKVYNTSVIGESASKPCVSIHHNNHTGRWLAPFQP
AWHPTRDDIFVMGSMHKPRQVEIFDSDLQLQCVLNDTEVMKSVCSLNRIHPSRDVVVGGN
SSGRVFIFGQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtacgccactcaaaacgactgcttgcaaaatctaacaaagtcaacgtttcc
ccccaaaaaaagcaacaaacgaaagttgcaaaagccccaaagacacagaccacgactaaa
cgaaaaaataaaagttcagacgcaaaggaaaacattcgcaagactcctgaaaacattgtt
gattcttcccaaactgatgattcttctgacattgacagcgaagatgaggacttttatcaa
aagattcagaatcagagaagaaagctagagcaagaaaagttgaaaatcatccaagatctg
aacctccatcaagctgctcttgaccttcaatcttcacttaaatcaaactctggggcaagg
aggaaaactgaaaaacgtgaagctggagtccctgtgcgaaaatcgagacgtttgcaaaac
ataaaacctgaggataaggataaagaaggatggagtgcttctactgaagtatcggaacca
aaagcacagagagtaacagatcaagaacataaaattgacccagtggtcaaggaaacaaca
accaagaagaattcggatcctgaagagactaataacaacaaggaatcttcaaaatacacg
gaattaatcgaaatcttcaaatctgagctaaaacttaagtttccagatgagaatcttcca
gtggacagtttcacaaaaaagcttgagtccaatacttcgagtcaatgtgttgttgaaaaa
gttgtgcagagtcgaatatacgccattgatatttatccaagccatagtgacatcataatg
gcagctggagggagagagggagacgtcggtatttggaatcttgacacttcatataaagga
gatgacaaagcgagtatcttttcattttttccacactcctcccctgttaaatgtcttcgg
tttgcaccagatgctccacataaactatatagttgtagctatgatggaatgtttcgttgc
actgatctaacaagtgaaacagtcagcaaggcaatacacgatgatgaaacataccctcct
atgtattttgattttatcggaaaaacttctcaatcttttattcttgcaaagtatggtggg
gatgtaatgttatgtgacaccagagaaagtgaggacaaatttaaaacatatggaactggc
atgagatctcttagaggagtttctgttcacccggttgattcacactactttgcagtcagt
ggaaatgacaaaactttggggtcggcacttatatttgacatgcgaaagttacttcgcaag
gcgtcacacccagtagtgacactacatggacacaaaaaagctgccaactcagcaattttt
tcaccaattactgggaacaaagtgtacaacaccagtgttattggagaaagtgcatctaaa
ccttgtgtatcaatacaccataacaaccacactggaaggtggctggctcctttccaacca
gcttggcatccaacaagggacgacatattcgtcatgggaagtatgcacaaaccaagacag
gttgaaatttttgactctgatctacagcttcaatgtgtacttaacgatacagaagttatg
aaaagtgtgtgttcactcaaccgtatccacccaagcagagatgtggtcgtcgggggcaac
tcaagcggacgggtttttatcttcgggcaatag
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