Ciona intestinalis (yellow sea squirt): 100182233
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Entry
100182233 CDS
T01056
Name
(RefSeq) ornithine decarboxylase-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00330
Arginine and proline metabolism
cin00480
Glutathione metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Module
cin_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
100182233
09106 Metabolism of other amino acids
00480 Glutathione metabolism
100182233
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100182233
Enzymes [BR:
cin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
100182233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
100182233
NCBI-ProteinID:
XP_009857659
LinkDB
All DBs
Position
2
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AA seq
433 aa
AA seq
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MNDKIITTAYSYINDQSIYIINDGTDGHSFAATMADNQTLSQTKSWDGSFYIGDLNRVFL
RHQQWKEVLPRVELFYAIKCCPLMPVIRLLAALGTGFDCASQNEIESVISIGVDPAKIIY
ALPCKPASQLQHARTRKVSLMTFDNEDELHKIQKYFPDARLVLRLLPDETGATFKMGSKF
GCTLEEGKKLLVHAKKLDLNVIGLSFFVGDDCKSSIGMRLNLENSRKMFDFASSIGINMD
LIDIGGGFPGNDKDQKLFLQIANDTRDTLDKLFPSECGVRIIAEPGRYFVESSFSIATSI
VGKKQSEDIIFYYTNESIYLAFWKTFLKAGKYTPIVLKTKRFSDKAVHDTIIYGTTCDGT
DIIAQNVALPELDLEDWLIWDDMGAYTVLCKFGFNGVMTTKAFYFVQEGAWKTIQGACCR
KDFLPKLEKSFGL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaaaataattacaactgcgtatagttacatcaacgaccaaagtatttacatt
atcaatgatggaactgatggtcacagttttgctgcaacaatggcggataatcaaacactt
agccagacaaagagttgggacggatcgttttacatcggagatttgaaccgtgtctttctg
agacatcagcaatggaaagaagtgctacctcgagtcgagctgttttatgcgattaagtgt
tgtcccttgatgccagttatccgtcttcttgctgcacttggtaccggcttcgactgtgca
agtcagaacgaaatagaatcagtaatcagcatcggagtagatcctgcaaaaataatctac
gcactgccatgcaagccagcgtctcaattacaacatgcacgaacaagaaaagtttcattg
atgacgtttgacaacgaagatgagttgcataaaatacagaagtactttcccgatgctcgg
ttggtattacgattactgcctgacgagactggagcaactttcaaaatgggaagtaaattt
ggatgtacattagaagagggtaaaaagttgctggtacacgctaagaaacttgacttaaac
gttattggcttgagtttttttgttggggacgattgtaaaagttcaataggcatgaggcta
aatttggaaaactccagaaagatgtttgactttgcttcctcaatcggtatcaacatggat
ttaattgatatcggtgggggatttcccggaaatgataaagatcagaaattgtttttacag
attgcaaatgacacacgcgacacattggataagttgtttccgtcagaatgtggggtccga
atcattgctgaaccaggaagatactttgttgagtcttcattctctatcgcaactagcatt
gttggcaagaaacaaagcgaagatattatcttttactatacaaatgaaagtatctaccta
gctttttggaaaacatttttgaaggcgggaaagtatacaccgatagtactgaagacgaag
agattcagtgataaagcggttcacgatacgataatatacgggacaacatgtgatggaacg
gatattattgctcaaaatgttgctttaccggaacttgatctagaagattggttgatttgg
gatgacatgggtgcttatactgttttgtgcaaatttggttttaacggagtcatgacaact
aaagcattttacttcgtacaagagggtgcctggaaaaccatacagggtgcttgttgccgc
aaagattttcttcccaaactagaaaagagttttggtctttga
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