Ciona intestinalis (yellow sea squirt): 100182244
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Entry
100182244 CDS
T01056
Name
(RefSeq) glypican-6-like
KO
K08112
glypican 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cin00535
]
100182244
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
100182244
Proteoglycans [BR:
cin00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
100182244
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cin00537
]
Others
100182244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
100182244
NCBI-ProteinID:
XP_018670725
Ensembl:
ENSCING00000002640
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MVSIHQLFVVFIGISVTVVTRGSSPPQRCHQVLEFYRQQNFNETLDVEVVNGKVCREPSC
CTGKMERNLRLKVEEDLKAGVLRGGEQVGGELKAKHDNLDKFFIELIDQSKSQLDILFYE
TYGSLYIDNSEIFSFFFKELEEYYRGGPLMVEEISENFFTSLMLKVFQLLNKSYLLDDEY
MACIGENVGRIRPFTDIPDRLSMQLQQAFVASRAFVRGLETGSDVIKKLSKISLSDECSS
SLMRMKYCGRCGGTMAPECDGFCLNVVRGCLCSLQQVGGVWKKYIDTMDSLLEKLSGSFN
IEIVLGSIDVQISEAIMTFQEHKVAITKTVFGICGKPKSNPNATLPTLTMSYPQPHGAEE
SYPVHYPSLYPGYQGPSSFEDLAGYGADPDNWIGDSPLSRKSRSTKKNRKRRGRKRSRDI
SMDQRGMLRPSSRYVEDKMLMTLWDNEYREESEGVDHSMSPTAAGTNLATLVGEVRSTLK
TARQHWENMGGSLCGNLRSDDCWTGSDRGSYSKTVVDPTATCSDPNPELRSLKVTPDHVT
RSEVTVLRNSINILKVAHKGVDGTMDDDTGVMS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggtttctattcatcaattgttcgttgtttttatcggaatatctgtcacagtggtcact
agagggagctcaccaccacagcgatgccaccaagtgttggaattttatcgacaacaaaat
tttaacgaaacattggatgtagaagtggttaatggtaaagtttgtcgtgagccgtcttgt
tgtacggggaagatggaacgcaacctccgtttaaaggtagaagaagatttgaaagcaggg
gtgttgagagggggtgaacaggtcgggggggaacttaaagcaaagcacgataaccttgac
aagttcttcattgagttaatcgaccaatcaaaatcgcaactcgacattttgttctacgaa
acatacggaagtctttacatcgacaactcggaaatattttcgtttttttttaaagaactt
gaagaatattatcgtgggggaccattaatggtggaagaaatctcggaaaactttttcacc
tcattgatgttgaaggtgtttcaacttctcaataaatcttacttgcttgacgacgagtat
atggcgtgcatcggggagaatgtggggaggatccgaccgttcaccgatattcccgatcgt
ttgtccatgcagttgcaacaagcgtttgtggcatcgagggctttcgttcgtgggttggaa
acaggaagtgatgtcataaagaaactatcaaagatatctttgagtgatgaatgctctagc
tccctcatgaggatgaagtattgtggtcgttgtggtggcacgatggcgccagagtgcgac
gggttttgtctcaacgtagttcgagggtgtttatgttcgttgcaacaagttgggggggtg
tggaagaagtatatagacacgatggattccctgcttgaaaaactatcaggctcgttcaac
atagagatcgtgttgggttcaatcgatgtgcaaatatcggaagccataatgacgttccag
gaacataaagtcgccatcactaaaacggtgttcggaatttgtgggaaaccgaaatccaac
cccaacgctacgttacctaccctaaccatgagttacccccaaccacacggagcagaagag
agctaccccgtacattacccatcgttatacccaggataccagggcccatcatcgttcgaa
gacctcgcaggatacggagccgaccctgataattggatcggggattccccactgtcgaga
aagtcaaggtcaactaaaaagaatcgcaagcgtcgaggtcgcaagaggtcgcgtgatatt
tctatggaccaacgagggatgttgagaccttcgagtagatacgtggaggacaaaatgtta
atgacactatgggataacgaataccgtgaggagagcgagggtgttgaccactcgatgtcg
ccaacagctgctggtacgaacctggcaacacttgtgggtgaagttcgctcaacactgaaa
actgcccggcaacactgggagaacatggggggaagtttgtgcggaaatttgagaagcgac
gattgctggacggggagtgatcgtggaagttactcaaagacagtggttgaccccacagcg
acctgtagtgaccccaaccctgagctgaggtcacttaaggtcacaccagatcatgtgacg
aggtcagaggtcactgttttacgcaactcgataaatatcctcaaggtggcgcacaagggt
gtggatggaacaatggacgatgatacaggtgtgatgtcataa
DBGET
integrated database retrieval system