Ciona intestinalis (yellow sea squirt): 100182345
Help
Entry
100182345 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100182345 isoform X2
KO
K10077
layilin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cin00536
]
100182345
04091 Lectins [BR:
cin04091
]
100182345
Glycosaminoglycan binding proteins [BR:
cin00536
]
Hyaluronan
Cell surface receptors
100182345
Lectins [BR:
cin04091
]
C-Type lectins
Others
100182345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Psg1
MLANA
MpPF26
Adeno_E3_CR2
Mid2
TMEM154
TMEM51
Podoplanin
DUF1648
EphA2_TM
FAM176
DUF6479
TM_ErbB1
Hum_adeno_E3A
SF3b1
Motif
Other DBs
NCBI-GeneID:
100182345
NCBI-ProteinID:
XP_018667468
LinkDB
All DBs
Position
5:2549554..2557579
Genome browser
AA seq
363 aa
AA seq
DB search
MSLFVLVALFVVGWSNAMNISWHKFGQEEYFISTSIIVDGINNASAECQKLNGSLVIIKN
NETQEFLVRKIGHVPRYPFAFYIGLRRFKNTSDGFIWDDGASVTSRPTHWYPGEPNNYMG
KNEGCVTMGLQTNSMPFLWYDEACNLPIRIICQRSLVRRTKPVVTTASISSSPTHNPEKS
IGATTPSVASSATLPTSFTSPSVNTPGLSNTVIYIIVGCVVGFVLLVVLLVICCWWRKRQ
RSEKKAPEVEMNVYETPIQAAEVVAVPDGVYNMADETNNAAASCSNEAAYNELFTSAQPN
ATNDTGYGVLQAPEEYATLERNENNKVPAAGLYSKLDRANDVILNGIDSEGNVGVYSQVT
KNR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttgttttggttgcgttgtttgttgttggttggagcaacgctatgaacatt
tcctggcacaaatttggacaagaggaatatttcatttcaacttctattatagttgatgga
attaataacgccagtgctgagtgtcagaagttaaacggaagtcttgtaataatcaagaac
aacgaaacacaggagtttctggtgcgaaaaataggacacgtacccagatatccgttcgcg
ttttacatcggtttacgaagattcaaaaacacaagcgatgggtttatttgggacgacggg
gcttcggttacttctcgcccaacacattggtatcctggcgaaccgaataattacatgggc
aagaacgagggttgtgtgactatgggtttacaaacaaattccatgccctttttatggtat
gacgaagcgtgcaatctcccaataagaataatctgtcagaggagccttgtaagacgcacg
aaacctgtcgtcacaacagcaagcatttcaagctcaccaacacataatccggaaaaatca
atcggtgccacgacaccatcagtggcgtcatctgctactctgccaacttcattcacctca
ccctcagttaacacacctggtttgagcaatacagttatttacatcatcgttggatgtgtc
gtgggtttcgttttgcttgttgtgttgttggtaatatgttgttggtggagaaagcgacaa
aggagcgagaagaaagcgcccgaagtggaaatgaatgtctatgagacgccaatccaagca
gcagaagttgtagccgtgccggatggcgtatataacatggcggacgagaccaacaatgca
gctgctagctgttcaaatgaagcagcatacaacgaattgttcacttctgctcaaccgaat
gcgacaaacgatactggttatggagttttgcaagcaccagaagaatatgcaacattagag
cgtaacgaaaacaacaaagttccagccgctggattgtactcgaaacttgacagggcaaat
gacgtcattttgaacggaattgactcagaaggcaacgtgggtgtatattcgcaagtgacc
aaaaatagatag
DBGET
integrated database retrieval system
