| Entry |
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| Name |
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
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| KO |
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| Organism |
cin Ciona intestinalis (yellow sea squirt)
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| Brite |
KEGG Orthology (KO) [BR:cin00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:cin03009]
100182454
Enzymes [BR:cin01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
100182454
Ribosome biogenesis [BR:cin03009]
Eukaryotic type
Other ribosome biogenesis factors
100182454
|
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
11:4072317..4073913
|
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| AA seq |
418 aa
MALYKSAEDVLNQVEAYKSSVKKAVFSTKFRNPKQLCALVMETLKYKAVLEDVLQQTKLI
QNTKGISRNIALPLLYDFLIGKGIRCGGKFKKLIKTRKSAINAAFARIKLKKKVSKTEDL
VEKSNFTLPKYLRVNTLLTTTTKVMETLNKDGFTRVDCSVNEIVEKQFSSDPDIPNLLVF
HFSTDFHDHGLYKLGHLIFQDKSSCMPAFVLNPSPNSHVIDACAAPGNKTSHLSAIMNNT
GKLFAIDRSSERIEVMKKQLKKASVKNCEVINSDFLILKPTDEKFKQVEYILVDPSCTGS
GIISRQLEHTEEKDSKCSKRLESLSKFQLKVLNHALSFPNVKRVVYSTCSIHEEENELIV
KLAVEQNSNFDLKKVLPKWHNRGLISDSFNAEKCVRCDPNVDFTNGFFVALFEKKMHE |
|---|
| NT seq |
1257 nt +upstreamnt +downstreamnt
atggctctttataaatctgctgaagatgtattaaaccaagtagaagcgtacaaatcttcc
gttaagaaagcagtattctctacgaagttccgaaacccaaagcaactttgtgcgttagtt
atggaaacgttaaaatacaaagcggttttggaagatgttttgcagcaaactaaactcatc
caaaatacgaaaggtatcagccgaaacattgccctgccccttctttacgattttttgatt
ggaaagggtattcgttgcggtggaaagtttaagaagttgataaaaacacgaaaatctgcc
attaatgcagcctttgccagaatcaaattaaaaaagaaagtttctaaaactgaagacctt
gtcgaaaaaagtaatttcacactgccaaagtatttaagagtgaacacgttgttgacaacc
acgacaaaagtaatggagacgttgaacaaggatggcttcacacgtgtggattgcagtgtg
aatgaaattgttgaaaaacagttcagttccgatccagatatcccaaacttgttagttttt
cattttagtacagatttccacgatcatggcctctacaaactgggccatttaatatttcaa
gacaaatctagctgtatgcccgcctttgtattaaatccctccccaaattcacatgttata
gatgcatgcgcagcaccagggaataagacttcacatttatcagcaatcatgaacaatact
ggtaaactttttgcaatcgacaggagttcggaaagaattgaagtgatgaaaaaacagctc
aaaaaagcaagcgttaaaaactgtgaagtcattaattctgactttttaattttaaaacca
acagatgaaaagtttaaacaagttgaatatattttggtggatccgtcatgcactggctcc
ggaatcattagcaggcagcttgaacacacagaggaaaaagattcaaaatgttcaaagcga
ttggaatcattgtctaaattccaactgaaagttttaaaccatgcactttcgtttccaaat
gttaaaagagtagtgtattcaacttgttcgattcatgaagaagaaaatgagcttattgta
aaacttgctgtggagcaaaattcaaactttgacctaaaaaaagttttgccaaaatggcac
aatagaggtttaatatcagattcatttaacgccgaaaagtgtgtccgttgcgacccaaat
gtagatttcacgaatggattttttgttgctttgtttgaaaaaaaaatgcatgaataa |
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