KEGG   Ciona intestinalis (yellow sea squirt): 100182475
Entry
100182475         CDS       T01056                                 
Name
(RefSeq) RNA-binding protein 5-like
  KO
K13094  RNA-binding protein 5/10
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100182475
Spliceosome [BR:cin03041]
 Complex A
  Other components
   Complex A specific factors
    100182475
SSDB
Motif
Pfam: OCRE G-patch RRM_1 G-patch_2 DUF7066 RED_N RRM_DEAH11 OTT_1508_deam
Other DBs
NCBI-GeneID: 100182475
NCBI-ProteinID: XP_002128897
LinkDB
Position
Unknown
AA seq 880 aa
MDHNSSRFEPYYTEEQRRYSPPHEEYFQEREHQWNQHVSQGSPRRSIGYDYPRRDQDPPG
RFRERSPYREYQEEEDDKGRRRRITPRRSRSPRRSRSPRLRRSRSPRRSRSPIRSRSPRR
SPRRSMSPIRSRSLRRSRSPRVSRSPRRSRSPRLSARRSSNGSFSGSPRRSPRRSPQRRD
QSPDYRQRRDKRELDRDRRDDDRRRTSDRDNTWARGSSSIVRIRDVPSTIDEVTIRSILQ
KFEASFVSARIKREYGTNNTSESVCDIQFERVRGAIEWMTQHDGQLDIRGVRMDMEYLDD
DHSDRSRDRRRDNYPTRGRDDDHVGYRTGPTDTMIVKGLNFDTTEATIRQSFEYITHFPI
VDIRLVRDKLGNSRGFCFVQWKTLEDCQQVLEYLRTATPRFHIDGRHVILDFSTPHGSSY
KGRSAPQPTASSAAISAAVQVAEAAIQAAQWSQQGKKAADSRNTADAMNGKANEYNRQAT
AAVASPAPKVENKPTVPPQSPKNAAPDPTKFKYDPTSGYYYDAVTGYYYDANSRYFYNSH
TGEYMYWDMNSRSYVKVSQDAQNKEKETKEKQQKEQKETKNVNAKKIAKDMARWAKAQNK
KKDEIKKMLDEPGTPGTAGTMAAPVVPPPRKKETYADAAFSVLEKQVSEAERQAAVHAAY
KQDLFRKPDLPGSRKKPSHDESGLVSYMKASDSEEEEEEEELNEESFLDWNKLACLLCKR
GFPSRDMLTKHKDLSDLHKQNLEKRKIKTGSLTKKKKDVGNVSAIKYRDRAAERRNKFGI
TDPPPKRSHGRDAYVPYEQPTKDGLDNTNIGNQMLQKMGWKQGSGLGKSMSGITAPIQVQ
QRSRGSGLGMRGSSYGLDGSEGDYKSVAKKLTYARYMETD
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggaccataatagttcacgttttgaaccttactacacagaagagcaaagaagatactct
cctcctcatgaagagtatttccaggagcgagagcatcagtggaaccagcatgtttctcaa
ggaagtcctaggcgcagcatcggatacgattatccaagaagagaccaggatcctcctgga
aggtttagagaacgatcaccttatagagaatatcaagaggaggaagatgataaaggaaga
cgcagaagaattactccaagaagatctagatcgccaagaagatcacggtctccaagatta
aggagatccaggtcccctagaagatctaggtctccaataagatctagatctccaagacgg
tctcccaggcgatctatgtcacctataagatcaaggtcgctgagaagatcacgatcacca
agagtttcacgatctcccagaagatctaggtctccaagattgtctgcacggaggtcttca
aatggatcttttagtggttccccccgtagatcaccaaggaggtccccacaaagaagagat
cagtctcctgattatcgacaaagaagagacaaaagggaacttgaccgtgatcgaagagat
gatgacagaagaagaacttctgaccgcgataatacctgggctcgtggctcaagttccatt
gtaaggatcagggatgtaccttccaccatcgatgaagtgacaattcgctccattcttcag
aagtttgaagcttcgtttgtctccgctcggatcaagcgagaatatggaacgaacaacaca
agtgagtctgtgtgcgatatccagtttgagagagtgagaggggctattgaatggatgacc
caacatgatggtcaactggacatccgtggtgtgcggatggacatggagtatttggatgat
gaccatagtgatagatctagagacagaagaagagacaattatccaacaagaggaagagat
gatgatcatgttggttatcgaactggaccaactgataccatgattgtaaaaggtcttaac
tttgatacaactgaagcaacaatacgtcagtcgtttgagtacataacacattttcctatt
gtggatatacgtttggtgagagacaagcttggaaactcaagaggattttgttttgttcag
tggaagacactggaagattgtcaacaagtgttagaataccttcgtacagcaacaccaagg
tttcatattgatggaagacatgttatattggactttagcaccccacatggttccagctat
aaagggagaagtgcacctcaaccaacagcttcatcagctgctatttctgctgcagttcaa
gttgctgaagctgcaatacaagctgcacaatggtcccagcaaggaaagaaagctgcagac
agtagaaatactgccgatgcaatgaatggcaaagctaatgaatacaacagacaagcaaca
gcagcagttgcatcaccagcacccaaggttgaaaacaagccaactgtgccaccccagtca
cctaagaatgcagctccagatcctaccaagtttaaatatgatcctacttctggttactat
tatgatgcagtgactggttattattatgatgccaattcaagatatttctacaacagccac
acaggtgaatacatgtattgggatatgaacagtcgctcttatgtaaaagtctcacaagac
gcacagaataaagagaaagaaacaaaagaaaaacaacaaaaggaacagaaggaaaccaag
aatgtcaacgccaaaaaaattgcaaaagacatggcgagatgggctaaagcgcagaacaag
aaaaaggatgaaataaaaaagatgctggatgaaccaggtacacctggaacagcagggaca
atggctgctcctgtggttccacctccaaggaaaaaagaaacttatgccgatgctgcattt
tctgttcttgagaagcaggtttctgaagcagagagacaggcagctgttcatgctgcttat
aaacaagatctgtttcgtaaaccagatcttcctgggtcaagaaagaaaccttcacatgat
gaatctgggttggtttcttacatgaaagcaagtgatagtgaagaagaggaagaagaagaa
gagttaaatgaggagagcttcctggactggaacaaacttgcgtgtcttctttgtaaacgt
ggatttccttcaagagatatgttgaccaaacacaaggacttatctgatcttcataaacag
aacttagaaaaaagaaaaattaaaactggaagcttgacaaagaaaaagaaagatgtgggt
aatgtcagtgcaattaagtatcgagatcgtgcggctgaaaggagaaataaatttggtatt
actgatcccccacctaagcgctctcatggtagagatgcctatgttccttatgagcaaccc
actaaagatggtttggataatacgaacattggaaaccaaatgttacagaagatgggttgg
aaacagggctctgggcttgggaaatcgatgagtggtataacagctcccatacaagtccaa
cagcgctctcgtggttcaggacttggtatgagaggatccagctatgggttggatggcagt
gaaggtgattacaaatctgtagcaaagaaactgacttatgcgagatacatggaaactgat
tga

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