Ciona intestinalis (yellow sea squirt): 100182485
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Entry
100182485 CDS
T01056
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100182485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100182485
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100182485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
100182485
NCBI-ProteinID:
XP_002119548
LinkDB
All DBs
Position
9:241712..244622
Genome browser
AA seq
742 aa
AA seq
DB search
MGIKNTEIEVEESDSQSEDEEVHKKLLLSIGVDLDSAKTDHGKQERTEATKDISVFSISS
QTVENSSSKIRLNDLMKGLKETVNINNLKKKITRVQHPDRSLDAPLSKPAAERLHRKVEY
EKNKKELKKWDAVVQKNRKAEQLTFPLNQQPLRIAQVDEHVASTKASNLTPLEQEIYSLL
HGNKFAERPDHDLSVAEEAAMAAMSLEDARERRAELQKHRALMSYHESKNKRIHKIKSKQ
YHRMLKKKKKKEMTELEVDGGDVEKGERMRAEERASLRHRTGSKWARNRALMAKHDSNTK
HELQEQLNKHRELTQKVPEVLEDLEENDEKDESSDDEGFEGRTFTVSEDNPWLRSVPEEE
GSKDQTEDTGDVGKNVPLDEKNGGENKSLEDETEGEKEVVEHVLLKEEIIPPTLSEEEVL
KPSRRMLRSWLIEKNTSPEAFEIQFPVKDTFSKFQKACVQLKEEVLAAEEEICEKKVEER
EEEDEEGNDEGLIETIDGVDDNVEEVVAKVRKLVEKSEDNVGNVKRVEVSAEKSFNVAET
DLSKTEATFVENAEDFDDQKMTIQQAFADDDVIADFTATKRKLIDDEAPKKVDLSLPGWG
AWGGAGVQPTRKRKRRFKPLPPRKPRKDGGLGSVIINEKRDVHISKHQVNQVPHPFTSME
QFERTITRPIGGTWNTPHTVKEMTKPKVVTQIGAIIDPMNKSEAFEECTDSKSKLKFVNG
KKDSRKNKRKLQRNENLMKLKS
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggggattaaaaacacggagattgaagttgaggaaagcgactcccaaagtgaggacgaa
gaagttcacaagaagttgttgctaagtattggagtggatttggactcagcgaagactgat
catgggaagcaagaaagaacagaggcaaccaaagatatttccgtgttttcgatttcttca
caaactgtcgaaaactcgagttctaagattcgtttgaatgatttaatgaaagggttgaaa
gaaacggtgaatataaataatttgaaaaagaaaataactcgagttcaacacccagatagg
agcctggatgcgccgttgtcaaaacctgcggcggagagactccatcgtaaagttgagtac
gagaaaaataagaaagagctaaaaaaatgggacgctgttgtacagaagaacaggaaagcg
gagcaacttacattcccgttgaatcaacagccattaagaattgctcaggtcgatgaacat
gttgcgagcactaaagcaagtaatttgactccattggaacaagagatttattcacttttg
catggaaacaagtttgctgagagaccggatcatgatttatctgttgcagaggaggcagca
atggctgctatgagcttggaggatgcgagagagagaagagcagagctgcaaaagcataga
gcgttgatgtcgtatcacgaatcaaagaataaaaggatccacaaaattaagagtaagcaa
tatcacagaatgttgaaaaagaagaagaagaaagagatgacggagttggaagtggatggt
ggggatgtagagaagggggaaagaatgagagcagaggagagagcttcattaagacatcgc
acgggaagcaaatgggcgcggaacagagcgctgatggcaaaacatgattcgaacaccaag
cacgaactgcaggaacaattgaacaaacatcgagagttgacgcaaaaagttcccgaagtt
ttggaggatttagaagaaaatgatgagaaagatgaaagctcagatgatgaaggatttgag
gggagaacttttactgtgagtgaggataacccttggttgagatctgttcctgaggaagag
ggatctaaggatcaaacggaggatactggagatgttggcaagaatgttcccttggatgaa
aagaatggcggcgaaaataagtccttagaagatgaaacggaaggagaaaaggaggttgtt
gaacatgtgttgttgaaagaagagattattccgcccaccctgtcagaagaagaggttttg
aaacccagtcgtcggatgttgagatcgtggttgattgagaagaatacgtcgcctgaggct
ttcgagatccagttccctgttaaagatacgtttagtaagttccaaaaagcgtgcgtgcaa
cttaaggaagaagtcctggctgctgaagaagagatatgcgagaaaaaggtggaagagaga
gaggaggaagacgaagaagggaatgatgaaggtttgattgaaactattgatggtgttgat
gataatgtggaagaagttgtagcaaaagtgaggaaactggttgaaaaatctgaggacaat
gtgggaaatgtgaaacgtgttgaagttagcgcggaaaagtcatttaatgttgctgaaact
gatttgtccaaaactgaagcaacgtttgtggaaaacgcagaagattttgatgatcaaaaa
atgacgattcagcaagcttttgctgatgatgatgtcatagctgatttcacggcaaccaag
cgaaaattaatcgatgacgaggcaccgaaaaaagttgatttgtcactgccaggatggggg
gcctgggggggtgcaggggttcagccaaccaggaaaagaaaaaggaggtttaaaccgttg
cctccacgtaagccacgtaaagatggtggtctcgggagtgtaataatcaacgaaaaacgt
gacgttcatatttcaaaacatcaagtcaaccaagttcctcatccgtttacaagcatggag
caatttgaacgcacgattacgaggcctattggtgggacatggaatacaccgcatacagtg
aaagaaatgaccaaaccaaaagttgtgacacagatcggggccataattgatcctatgaat
aaatcagaggcatttgaggaatgcacagactcaaaatcaaaactgaaatttgtaaacggg
aaaaaagattcccgaaaaaataagcgaaaactgcaacggaatgaaaatttaatgaaacta
aaaagttaa
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