KEGG   Ciona intestinalis (yellow sea squirt): 100182504
Entry
100182504         CDS       T01056                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100182504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100182504
   03400 DNA repair and recombination proteins [BR:cin03400]
    100182504
Spliceosome [BR:cin03041]
 Complex B
  Other components
   Prp19 complex
    100182504
 Complex C
   Prp19-CDC5 complex
    100182504
DNA repair and recombination proteins [BR:cin03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100182504
SSDB
Motif
Pfam: BCAS2
Other DBs
NCBI-GeneID: 100182504
NCBI-ProteinID: XP_002128040
Ensembl: ENSCING00000013363
LinkDB
Position
Unknown
AA seq 228 aa
MAGEVTVDALPYFDKGYDDPGVREAATAMVEEETRRYRPTRNYLNFLAPPNIHAFETDIM
KNEFERLEARQPMELLSMRRYDLPIPPSGQRNDITAWEECVKNSHAQLQHQDVRIENLNL
MLEHGSNAWRLYNEQLVAMLQDAQKQLQSIKKDIQDVNWERKSEQTKAGEKLRTLEANWV
NLVSKNYEIEEAIFHLEVLAKTENAKMAQSHAENGKISLKVAENGEME
NT seq 687 nt   +upstreamnt  +downstreamnt
atggctggtgaagttacagtagatgctttaccttactttgataaaggctatgatgatcct
ggagtacgagaagcagcaactgcaatggttgaagaagaaacaagaagatatcgaccaaca
agaaactatttgaactttttagctccacctaacatacatgcatttgaaaccgatataatg
aaaaatgagtttgagcgattggaggcaagacaacctatggaacttcttagcatgcgtagg
tatgatctcccaatcccaccaagtggtcaaaggaatgatatcactgcttgggaggaatgc
gtaaaaaattctcatgctcagttgcagcatcaggatgttcgaatagaaaacttaaactta
atgctggaacatggaagcaacgcttggcgattatacaatgaacaattggttgcaatgctt
caggatgcacagaaacagttgcagagcataaaaaaagacattcaggatgtcaattgggaa
cgaaaatctgagcaaactaaagcaggggaaaagctgagaacattggaagcaaattgggtt
aatttagtgagcaaaaactatgaaattgaagaagccatatttcatttagaggttttggca
aagactgaaaatgcaaaaatggctcaatctcatgctgaaaacggaaaaatctcattaaaa
gttgctgaaaatggagaaatggagtag

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