Ciona intestinalis (yellow sea squirt): 100182555
Help
Entry
100182555 CDS
T01056
Name
(RefSeq) protein turtle homolog A isoform X2
KO
K22656
immunoglobulin superfamily member 9B
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cin04515
]
100182555
Cell adhesion molecules [BR:
cin04515
]
Immunoglobulin superfamily
Other
100182555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
C2-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
100182555
NCBI-ProteinID:
XP_018666917
LinkDB
All DBs
Position
3:complement(1300448..1316277)
Genome browser
AA seq
1216 aa
AA seq
DB search
MNGQSQALLVGTIFWILLSVETRGLISVSVGATALLPCPSSRNDQDLPHVIEWLRQDRPV
PVFIKIGKYPPHVNPHFKGRMSLLSNTATLRIQKVKLEDEGWYECRAYYFKHAVESSNGT
LVHPSNGTLTKLYVTAPPAFKSTPPPSTVARVRESLLLQCRVVGKPPPDVTWRKDGWLLQ
NGENGIKINGGKLLVRSLTTSHRGNYECQGRNPQGQVEHTTSVFVQAPPEITVSPKDLDA
KEEQDAFFYCKAEGYPADISYSWFFNGLEVGSCPQLRGRFRTFNDGTFEIESVSKEDTGN
ISCEAANDFGIAPRVTARLVVQYAAQVVDMPPINFAGISLPLILRCPSIAEPEVSSVTWR
KNGNSVGSGNNGGDRVFVNISGDLIFKAIQQSDEGLYSCTPYNILGTGGESPKMRLVVKN
PPQFIAKPETQYELEIGKPFIASCYGNGDPPTTVTWRKVEAENDYFNGDRVSRNHSSLFI
TSVSKSDNGIWQCVLSNAVANVTTNTTINVKYTTPHAASEVTVATSSSNATVKWVPGYDG
GYPQHFMIWYKKAEQGDHTWSTSYVEGGRKVATVSRLEPGTVYQFSLLSENVLGSGPFSR
TVTKKTKVITKNKSLASVTHVAIPPPRDLQYYIESEIIVLSWKPPTLPPSISLLGFLVEF
QKQNNNPDEAAPLDKSIENRSKETMSNARLRRNSISSPVIVKGQLTESDSNAWTILNAVA
ANTTSYGIPAGSLVQNAIYRFRVLSVTSESYGLPSQYVTVSTEGLSVYLPASPIGNYASS
SIANAGLISGVITGSIFIFVTIAIAIGYWHHRHGATSALQQTSYLKEDAVKSFLTNRKED
QDFAKSENYKYDLSPPESSVLYTKERREENINDGVLWKIKKKIEKNKKRRDDHKVEHYFE
KNKKVKRSKSLSQHGKETSKLSSIQRSLDGKFHVSNVRKSDASLSYSPDQPNQVTWRKAG
RSERKMRPISDSYLSRNPPKMFEVEESIIEEEGTLEIDCSRSNIEVRYLRDNAQRFSTRK
WEPHFNYPASMGGTLPLMNSTVKSYEPGLNLPRHLSPRADVSLHSTDSHLSCPAAEYVYL
RDINNDTATDSVTKRISSTSHIMFPRLRPTSTASLNFKYHTTQHPRHNEVLRLNETNKRH
PSTKSLSTRQVNQQLIVNTANDFATCNNRNMQSTQQPLIATNSFDTQQTIKDDIRKTKTS
STIIVFNFSTDFKSTG
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacaaagtcaagccctgttggttggaactatattctggattcttttgtcagtt
gaaacaaggggtctgatatcagtaagcgttggagccacagcattgttaccttgtcctagt
tcacgaaacgatcaagatctcccccacgtcatagaatggttacgtcaggacaggcctgtt
ccagtctttatcaaaataggaaaatacccgccgcatgtcaatcctcactttaaaggacgc
atgtcactgctatccaacactgccaccttacggatacaaaaagtaaaactagaggacgaa
ggatggtacgagtgtcgtgcatattatttcaaacatgctgtggaaagttcaaacggaact
ctagttcacccatctaatggaacacttaccaaactttacgtaaccgcgccccctgccttt
aaatcgaccccaccaccctcaaccgtggctcgtgttcgtgaatcgttacttctgcaatgt
cgtgttgtcgggaaaccccctcctgacgtcacatggaggaaggatggctggttgttgcaa
aacggcgagaatgggattaaaatcaacggaggaaaacttctcgttagatcactgactacg
tcacatcgtggcaactatgaatgccagggcagaaacccacagggccaagtagaacatacg
acatctgtgtttgtacaagccccgcctgaaattacggtatctccgaaagatcttgatgca
aaagaagaacaagacgcttttttttactgcaaagcagaaggatatccagctgatataagc
tacagttggtttttcaatgggttggaggttggtagttgcccacagttacgcggccggttc
agaacatttaacgacggaacattcgaaattgagagtgttagcaaagaagacaccggaaat
ataagttgtgaggctgcgaacgattttgggattgcaccacgtgtgactgcacggcttgta
gttcaatatgccgcccaagtggtcgatatgccgccaattaacttcgctggaatttccctt
cctttaattttacgttgcccatcgatagctgaaccggaggtcagtagtgtaacgtggagg
aagaacggaaacagcgttggaagtggcaacaacgggggtgatcgtgtatttgtaaatatc
tcgggagatctcatatttaaggccatccagcaatctgatgaaggtctttactcatgtaca
ccttataacatattggggacgggaggagagtctccaaaaatgcgactagttgtaaaaaat
cctccgcaatttattgctaaacctgaaacgcaatatgaactggaaatcgggaagcctttt
attgcgtcatgctacggaaacggtgaccccccgacaactgtgacctggcgaaaagtggaa
gcagaaaatgattacttcaacggtgaccgtgtctcacgaaatcatagcagtctcttcatt
acctctgtttccaaatctgataacggaatatggcaatgtgttctttccaatgctgtagcg
aatgtaactactaatacgacaattaatgtgaaatatacaacaccacatgctgcgagtgag
gttacagttgcgacgtcatcgagcaacgcgactgtcaagtgggtgcctggatatgacggt
ggttacccgcaacatttcatgatctggtataaaaaagctgaacagggcgaccatacgtgg
tcaacgtcttatgttgaaggaggtcgcaaggtggcgactgtaagtcgtctcgaaccagga
acagtttatcaattttcattactctcggaaaatgttcttggtagtggtccttttagcaga
actgtcaccaagaaaactaaagtgattactaagaacaagagccttgcatctgttacacac
gtcgcaataccgccacctcgtgaccttcaatattacatcgaatcagagataattgtgtta
tcatggaaaccacctacgctcccaccatctattagtttgctaggtttcttggtcgaattt
caaaaacaaaacaataatcctgatgaagctgcccctcttgataaatctatagaaaatcga
tccaaagaaacaatgagcaatgcacgattgagaaggaattcgatctcatcaccagtgatc
gtaaaaggacaattaacagaatcggattcaaatgcatggacaatcttaaatgcggtagcc
gctaatacgacttcatacggcataccagctggtagtctggtgcagaatgcgatttatcga
tttcgtgttttatccgttaccagcgaatcatacggattgccaagccaatacgtcaccgtg
agcaccgaagggctttcggtgtacctccccgcttcacctattgggaattatgcttcctca
tccatcgcgaatgctggcttgatatccggcgttataaccggatctatatttatatttgta
accattgccattgctatcggatactggcatcaccgacacggagcaacttcggcacttcaa
caaacgagctacttaaaggaagatgccgtaaaaagctttcttaccaaccggaaagaagac
caagattttgcaaaatcagaaaactataaatatgatctttctccgcctgaaagctcagtt
ttgtacacgaaagagcgaagggaggaaaacattaatgatggagttttgtggaagatcaaa
aagaagattgaaaagaacaaaaagagaagagatgatcataaagtagaacactactttgag
aaaaataagaaagtgaaacgcagcaaaagtttgtcacaacacggtaaagaaacaagcaaa
ttatcttcgattcagagatcactagatggaaaattccatgtttctaatgtccgcaagtcc
gatgcatctctatcatattcccccgatcaaccaaaccaagtgacttggaggaaagctgga
agaagtgaaaggaaaatgagaccaatcagcgactcttatctttcgagaaatcctccgaag
atgtttgaagtggaggaaagcatcatagaagaggaaggaacattggaaattgattgcagc
agaagcaatatagaagttcggtatctcagagataacgctcaaagattttctacacgaaag
tgggaaccgcatttcaattatcccgctagtatgggaggaacactacctttaatgaactca
acggtgaagtcatatgaaccgggattgaatttaccacgtcatctttcaccacgtgctgac
gttagtttacattccacagactcacatctatcttgtccagcagcagaatatgtttatctt
cgtgacataaataacgatactgcgacagattcggtaactaaacgaattagttcgacatct
catattatgtttccgaggctcaggccaacttcaaccgcttcattaaattttaagtatcac
acaactcaacacccacgccacaatgaagttttaagattaaacgaaacgaacaaaaggcat
ccttcaactaaatctctctcaacaagacaagtcaatcagcagttaatcgtaaacaccgca
aacgattttgcaacctgtaataatagaaacatgcaatccacacaacagccgttgatagct
accaattcttttgacactcagcaaacaatcaaagatgacattagaaaaacaaaaacatct
tcgacgattatcgtattcaacttctctaccgactttaaatccactggttaa
DBGET
integrated database retrieval system