KEGG   Ciona intestinalis (yellow sea squirt): 100182555
Entry
100182555         CDS       T01056                                 
Name
(RefSeq) protein turtle homolog A isoform X2
  KO
K22656  immunoglobulin superfamily member 9B
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:cin04515]
    100182555
Cell adhesion molecules [BR:cin04515]
 Immunoglobulin superfamily
  Other
   100182555
SSDB
Motif
Pfam: Ig_3 I-set Ig_2 ig V-set fn3 C2-set Ig_DSCAM-DSCAML_C Pur_ac_phosph_N
Other DBs
NCBI-GeneID: 100182555
NCBI-ProteinID: XP_018666917
LinkDB
Position
3:complement(1300448..1316277)
AA seq 1216 aa
MNGQSQALLVGTIFWILLSVETRGLISVSVGATALLPCPSSRNDQDLPHVIEWLRQDRPV
PVFIKIGKYPPHVNPHFKGRMSLLSNTATLRIQKVKLEDEGWYECRAYYFKHAVESSNGT
LVHPSNGTLTKLYVTAPPAFKSTPPPSTVARVRESLLLQCRVVGKPPPDVTWRKDGWLLQ
NGENGIKINGGKLLVRSLTTSHRGNYECQGRNPQGQVEHTTSVFVQAPPEITVSPKDLDA
KEEQDAFFYCKAEGYPADISYSWFFNGLEVGSCPQLRGRFRTFNDGTFEIESVSKEDTGN
ISCEAANDFGIAPRVTARLVVQYAAQVVDMPPINFAGISLPLILRCPSIAEPEVSSVTWR
KNGNSVGSGNNGGDRVFVNISGDLIFKAIQQSDEGLYSCTPYNILGTGGESPKMRLVVKN
PPQFIAKPETQYELEIGKPFIASCYGNGDPPTTVTWRKVEAENDYFNGDRVSRNHSSLFI
TSVSKSDNGIWQCVLSNAVANVTTNTTINVKYTTPHAASEVTVATSSSNATVKWVPGYDG
GYPQHFMIWYKKAEQGDHTWSTSYVEGGRKVATVSRLEPGTVYQFSLLSENVLGSGPFSR
TVTKKTKVITKNKSLASVTHVAIPPPRDLQYYIESEIIVLSWKPPTLPPSISLLGFLVEF
QKQNNNPDEAAPLDKSIENRSKETMSNARLRRNSISSPVIVKGQLTESDSNAWTILNAVA
ANTTSYGIPAGSLVQNAIYRFRVLSVTSESYGLPSQYVTVSTEGLSVYLPASPIGNYASS
SIANAGLISGVITGSIFIFVTIAIAIGYWHHRHGATSALQQTSYLKEDAVKSFLTNRKED
QDFAKSENYKYDLSPPESSVLYTKERREENINDGVLWKIKKKIEKNKKRRDDHKVEHYFE
KNKKVKRSKSLSQHGKETSKLSSIQRSLDGKFHVSNVRKSDASLSYSPDQPNQVTWRKAG
RSERKMRPISDSYLSRNPPKMFEVEESIIEEEGTLEIDCSRSNIEVRYLRDNAQRFSTRK
WEPHFNYPASMGGTLPLMNSTVKSYEPGLNLPRHLSPRADVSLHSTDSHLSCPAAEYVYL
RDINNDTATDSVTKRISSTSHIMFPRLRPTSTASLNFKYHTTQHPRHNEVLRLNETNKRH
PSTKSLSTRQVNQQLIVNTANDFATCNNRNMQSTQQPLIATNSFDTQQTIKDDIRKTKTS
STIIVFNFSTDFKSTG
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgaatggacaaagtcaagccctgttggttggaactatattctggattcttttgtcagtt
gaaacaaggggtctgatatcagtaagcgttggagccacagcattgttaccttgtcctagt
tcacgaaacgatcaagatctcccccacgtcatagaatggttacgtcaggacaggcctgtt
ccagtctttatcaaaataggaaaatacccgccgcatgtcaatcctcactttaaaggacgc
atgtcactgctatccaacactgccaccttacggatacaaaaagtaaaactagaggacgaa
ggatggtacgagtgtcgtgcatattatttcaaacatgctgtggaaagttcaaacggaact
ctagttcacccatctaatggaacacttaccaaactttacgtaaccgcgccccctgccttt
aaatcgaccccaccaccctcaaccgtggctcgtgttcgtgaatcgttacttctgcaatgt
cgtgttgtcgggaaaccccctcctgacgtcacatggaggaaggatggctggttgttgcaa
aacggcgagaatgggattaaaatcaacggaggaaaacttctcgttagatcactgactacg
tcacatcgtggcaactatgaatgccagggcagaaacccacagggccaagtagaacatacg
acatctgtgtttgtacaagccccgcctgaaattacggtatctccgaaagatcttgatgca
aaagaagaacaagacgcttttttttactgcaaagcagaaggatatccagctgatataagc
tacagttggtttttcaatgggttggaggttggtagttgcccacagttacgcggccggttc
agaacatttaacgacggaacattcgaaattgagagtgttagcaaagaagacaccggaaat
ataagttgtgaggctgcgaacgattttgggattgcaccacgtgtgactgcacggcttgta
gttcaatatgccgcccaagtggtcgatatgccgccaattaacttcgctggaatttccctt
cctttaattttacgttgcccatcgatagctgaaccggaggtcagtagtgtaacgtggagg
aagaacggaaacagcgttggaagtggcaacaacgggggtgatcgtgtatttgtaaatatc
tcgggagatctcatatttaaggccatccagcaatctgatgaaggtctttactcatgtaca
ccttataacatattggggacgggaggagagtctccaaaaatgcgactagttgtaaaaaat
cctccgcaatttattgctaaacctgaaacgcaatatgaactggaaatcgggaagcctttt
attgcgtcatgctacggaaacggtgaccccccgacaactgtgacctggcgaaaagtggaa
gcagaaaatgattacttcaacggtgaccgtgtctcacgaaatcatagcagtctcttcatt
acctctgtttccaaatctgataacggaatatggcaatgtgttctttccaatgctgtagcg
aatgtaactactaatacgacaattaatgtgaaatatacaacaccacatgctgcgagtgag
gttacagttgcgacgtcatcgagcaacgcgactgtcaagtgggtgcctggatatgacggt
ggttacccgcaacatttcatgatctggtataaaaaagctgaacagggcgaccatacgtgg
tcaacgtcttatgttgaaggaggtcgcaaggtggcgactgtaagtcgtctcgaaccagga
acagtttatcaattttcattactctcggaaaatgttcttggtagtggtccttttagcaga
actgtcaccaagaaaactaaagtgattactaagaacaagagccttgcatctgttacacac
gtcgcaataccgccacctcgtgaccttcaatattacatcgaatcagagataattgtgtta
tcatggaaaccacctacgctcccaccatctattagtttgctaggtttcttggtcgaattt
caaaaacaaaacaataatcctgatgaagctgcccctcttgataaatctatagaaaatcga
tccaaagaaacaatgagcaatgcacgattgagaaggaattcgatctcatcaccagtgatc
gtaaaaggacaattaacagaatcggattcaaatgcatggacaatcttaaatgcggtagcc
gctaatacgacttcatacggcataccagctggtagtctggtgcagaatgcgatttatcga
tttcgtgttttatccgttaccagcgaatcatacggattgccaagccaatacgtcaccgtg
agcaccgaagggctttcggtgtacctccccgcttcacctattgggaattatgcttcctca
tccatcgcgaatgctggcttgatatccggcgttataaccggatctatatttatatttgta
accattgccattgctatcggatactggcatcaccgacacggagcaacttcggcacttcaa
caaacgagctacttaaaggaagatgccgtaaaaagctttcttaccaaccggaaagaagac
caagattttgcaaaatcagaaaactataaatatgatctttctccgcctgaaagctcagtt
ttgtacacgaaagagcgaagggaggaaaacattaatgatggagttttgtggaagatcaaa
aagaagattgaaaagaacaaaaagagaagagatgatcataaagtagaacactactttgag
aaaaataagaaagtgaaacgcagcaaaagtttgtcacaacacggtaaagaaacaagcaaa
ttatcttcgattcagagatcactagatggaaaattccatgtttctaatgtccgcaagtcc
gatgcatctctatcatattcccccgatcaaccaaaccaagtgacttggaggaaagctgga
agaagtgaaaggaaaatgagaccaatcagcgactcttatctttcgagaaatcctccgaag
atgtttgaagtggaggaaagcatcatagaagaggaaggaacattggaaattgattgcagc
agaagcaatatagaagttcggtatctcagagataacgctcaaagattttctacacgaaag
tgggaaccgcatttcaattatcccgctagtatgggaggaacactacctttaatgaactca
acggtgaagtcatatgaaccgggattgaatttaccacgtcatctttcaccacgtgctgac
gttagtttacattccacagactcacatctatcttgtccagcagcagaatatgtttatctt
cgtgacataaataacgatactgcgacagattcggtaactaaacgaattagttcgacatct
catattatgtttccgaggctcaggccaacttcaaccgcttcattaaattttaagtatcac
acaactcaacacccacgccacaatgaagttttaagattaaacgaaacgaacaaaaggcat
ccttcaactaaatctctctcaacaagacaagtcaatcagcagttaatcgtaaacaccgca
aacgattttgcaacctgtaataatagaaacatgcaatccacacaacagccgttgatagct
accaattcttttgacactcagcaaacaatcaaagatgacattagaaaaacaaaaacatct
tcgacgattatcgtattcaacttctctaccgactttaaatccactggttaa

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