Ciona intestinalis (yellow sea squirt): 100182651
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Entry
100182651 CDS
T01056
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100182651
Enzymes [BR:
cin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100182651
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100182651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_4
zf-rbx1
zf-C3HC4_4
TRAF3_RING
Rad50_zn_hook
Prok-RING_4
Sina_RING
zf-RING_11
SOG2
zf-RING_6
Lar_restr_allev
zf-UDP
Zn_ribbon_TFIIB
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
100182651
NCBI-ProteinID:
XP_002127685
Ensembl:
ENSCING00000006925
UniProt:
F6WAE5
LinkDB
All DBs
Position
7:complement(942038..946793)
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AA seq
224 aa
AA seq
DB search
MSQNDFDSSVIEIPSITRRRSRIESNTSSGSGDVIIIESPTEGTNARATRRRRRSATSGQ
NEIVDLTCATETSSVSVDLVDLTLTPSDRSSNSRTQSRERTPTTQRRSRPLSSIRRSNPS
QATSARRTDTARSSMASASRVMIPPETPTVIDPRFQNLPEINCPVCLETLKTILSQGNEI
RSTVCGHVFCHNCISLAIRSSKKCPTCRRKLTLKNVHPLYLTIT
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacgactttgattcaagtgtgatagaaattccttcaataactaggagaaga
tcgcgcatagaatcgaacacttcaagtggaagtggtgatgtcataattattgagtctccg
actgaaggaacaaatgcgagagccacaaggaggcgacgaagatctgcaacatccggtcaa
aatgagattgtcgacttaacgtgtgcaacggaaacttcgagtgtttcagttgatcttgtc
gaccttactctcacaccaagtgatcgttcaagcaactcaagaacacaatcccgggaaagg
acacctactacgcagcgacggtcgcgaccgttatcgagcattcgtcgttcaaatccgtca
caagctacttctgcacgacgcacagatacagcaaggtcttccatggcatctgcatctcgt
gttatgattcccccagaaacaccgacagtaatagacccaagattccaaaacctgcctgaa
atcaactgccccgtttgcctcgaaacgttaaaaacgattctcagccaaggcaacgaaatt
cgttccacagtctgcggtcacgtgttctgccacaactgcatttcattggccatccgcagc
agcaaaaagtgtccaacttgccgacgaaaactgactttgaaaaatgtgcacccactttac
ctaacaataacgtaa
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