KEGG   Ciona intestinalis (yellow sea squirt): 100182651
Entry
100182651         CDS       T01056                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cin04121]
    100182651
Enzymes [BR:cin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100182651
Ubiquitin system [BR:cin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    100182651
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_4 zf-rbx1 zf-C3HC4_4 TRAF3_RING Rad50_zn_hook Prok-RING_4 Sina_RING zf-RING_11 SOG2 zf-RING_6 Lar_restr_allev zf-UDP Zn_ribbon_TFIIB zf-RING_10
Other DBs
NCBI-GeneID: 100182651
NCBI-ProteinID: XP_002127685
Ensembl: ENSCING00000006925
UniProt: F6WAE5
LinkDB
Position
7:complement(942038..946793)
AA seq 224 aa
MSQNDFDSSVIEIPSITRRRSRIESNTSSGSGDVIIIESPTEGTNARATRRRRRSATSGQ
NEIVDLTCATETSSVSVDLVDLTLTPSDRSSNSRTQSRERTPTTQRRSRPLSSIRRSNPS
QATSARRTDTARSSMASASRVMIPPETPTVIDPRFQNLPEINCPVCLETLKTILSQGNEI
RSTVCGHVFCHNCISLAIRSSKKCPTCRRKLTLKNVHPLYLTIT
NT seq 675 nt   +upstreamnt  +downstreamnt
atgagccaaaacgactttgattcaagtgtgatagaaattccttcaataactaggagaaga
tcgcgcatagaatcgaacacttcaagtggaagtggtgatgtcataattattgagtctccg
actgaaggaacaaatgcgagagccacaaggaggcgacgaagatctgcaacatccggtcaa
aatgagattgtcgacttaacgtgtgcaacggaaacttcgagtgtttcagttgatcttgtc
gaccttactctcacaccaagtgatcgttcaagcaactcaagaacacaatcccgggaaagg
acacctactacgcagcgacggtcgcgaccgttatcgagcattcgtcgttcaaatccgtca
caagctacttctgcacgacgcacagatacagcaaggtcttccatggcatctgcatctcgt
gttatgattcccccagaaacaccgacagtaatagacccaagattccaaaacctgcctgaa
atcaactgccccgtttgcctcgaaacgttaaaaacgattctcagccaaggcaacgaaatt
cgttccacagtctgcggtcacgtgttctgccacaactgcatttcattggccatccgcagc
agcaaaaagtgtccaacttgccgacgaaaactgactttgaaaaatgtgcacccactttac
ctaacaataacgtaa

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