Ciona intestinalis (yellow sea squirt): 100182748
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Entry
100182748 CDS
T01056
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03430
Mismatch repair
cin03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100182748
03460 Fanconi anemia pathway
100182748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100182748
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
100182748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
100182748
NCBI-ProteinID:
XP_002122535
Ensembl:
ENSCING00000002563
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
MAESGVVVIKRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAGSTTITVSLKSGGLKML
QISDNGHGIRREDMEIVCERFTTSKLKEFDDLKTIATFGFRGEALASISHVAHLSITSRT
KDSKCGYKASYLDGRIKGSPRPTAGNTGTQITVEDLFYNVPTRRKAFKSPSEEHQKIADV
MTRYALHNSGKSFTLRKTDGDSGPSGGVSVRTQLGSSFVTNIGTLFGSKVAKEVIEVKHY
DTQLQLKTFGYISNANCSMKKFVFLLFINNRLVDCSVLKKSLDSVYQSYLPKGSHPFVYL
SLEMPTNNLDVNVHPTKHEVHFLHEDEVVTSVQKQVEASLLSCDSSRTFYMQKLLPTNTS
KPTGENTKESTKDTTHPTKDKQLPTRVYDHQLVRTDSKLQKLDSFLLKSKNKVVEEPKIP
STPDDIESHDKTSAGLPRKREIRLTSVLQLQDEVKQKSNKDLCLVLHDHTFVGCVEPELA
LIQHQTKLHLVNTGRLSEQLFYQILLQDFGNFAIFRLTEAAPIYELAMLGLNSEESGWTP
ADGSKEKLAKYVVNFLVEKAEMLSDYFCLDITKDGMISGIPMLLKQYNPPLHGLPTFVMR
LATEVDWESEKSCFDTVCKEIARFYAVKNNFTDSDIFSEEPVVVETDSEWSPWKQMVEHV
VFRALRDVIVPMTMGEDGTFLQLANLPDLYKVFERC
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaagtggagttgtagtgattaagcgactcgatgaaaccgtcgtcaaccgaatc
gcggcaggcgaggtcattcaacgtcccgcaaatgctgtgaaggaaatgatcgagaattgt
ctggatgctgggtctactactattactgtttcgttgaaatctggtggtttgaagatgtta
cagatatccgataatggacatgggataagaagggaagacatggagattgtttgtgagagg
ttcacgacaagtaaactcaaagaatttgatgatttgaaaacaatcgcaacgtttgggttt
cgaggagaggctttagcaagcatcagtcatgtcgcgcatctttccatcacaagtcgtact
aaagatagtaaatgtgggtacaaggcaagctatctggatggtcgtatcaaaggatccccc
cgacccacagcgggcaacactggcacgcagattactgtggaagatttattttacaacgtt
ccaacgagaagaaaagcgtttaaaagtccgtcagaagaacatcagaagatagctgatgta
atgacgagatacgctttgcacaactccggcaaatcgttcactcttcgtaaaacagatgga
gattctgggccatcagggggggttagtgtgcggacacaacttggttcgtcatttgtgaca
aatatcgggacactgttcgggtctaaggtcgccaaagaggtcatcgaggttaaacattac
gatacgcaacttcaacttaagacatttggttatatcagcaatgccaattgttcgatgaag
aagtttgtatttctattgtttattaacaatcgtctcgttgattgctccgtgcttaagaag
agtcttgactctgtgtatcaatcgtacttaccaaaaggaagtcacccgtttgtttacttg
agtcttgaaatgccgaccaacaatcttgacgtcaatgttcatccaactaaacatgaggtt
cacttcttacacgaggatgaagtagttacaagtgtacagaagcaagtggaagcttcatta
ttatcgtgcgattcttctcgtactttctatatgcagaaactgttgccaacaaacacatca
aaaccaacaggagaaaacacgaaagaatcaacaaaagatacaacacatccaaccaaggac
aagcaactccccacaagagtatacgaccaccagctggtaaggaccgacagcaagttacag
aaactcgattcatttcttctgaagtcaaagaacaaagtagttgaagaaccaaagatacca
tcaacccctgatgacatagagtcacatgataaaacttcggccgggttgccacggaaacgt
gagatccgactcactagcgtcctccagctgcaagatgaggtcaagcaaaagtcaaataaa
gatttatgtttagtgttgcacgatcacacttttgttggttgtgttgaacctgaacttgca
ttgattcaacaccaaactaaactacatttggtcaacactggaagattaagtgaacaatta
ttctaccaaatattgctccaggattttggaaactttgctatttttcgtctcacggaggca
gcaccgatctacgaacttgcaatgcttggattgaactcggaggaatcgggatggacacca
gcagatggcagtaaagagaaacttgcgaaatatgtcgtcaatttcctcgttgaaaaagct
gaaatgttgagcgactatttctgcttggacatcacaaaggacggcatgatcagtggcatt
cccatgttattaaagcaatacaatccccccttgcatggattgccaacctttgtaatgaga
ttggcaactgaggttgattgggaatcggagaagtcatgttttgatacggtgtgtaaggag
atagcaaggttctacgcggtcaagaacaatttcacggactctgacattttctccgaggaa
ccggttgtcgtagaaactgacagcgagtggtcgccatggaaacaaatggtggaacacgtg
gtgtttcgtgcgttgcgtgatgtcattgttcccatgacgatgggggaagatgggacgttt
ctacaacttgctaatttacccgatctttataaagtgtttgaacgatgctga
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integrated database retrieval system
