Ciona intestinalis (yellow sea squirt): 100182787
Help
Entry
100182787 CDS
T01056
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100182787
Enzymes [BR:
cin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100182787
Ubiquitin system [BR:
cin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
100182787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
100182787
NCBI-ProteinID:
XP_002119818
LinkDB
All DBs
Position
4:complement(375430..377627)
Genome browser
AA seq
599 aa
AA seq
DB search
MNNLESITASLVREYLHRHKCVQSLQQLDVEFPRDESSISNRSKLASALNMDGLMKVNKI
KKQPYKSVLEVMVSNFVLKNNTPVIVGSDVGLPQQSVQNEDSAKLKTSQSENTNKNNYHD
TQPVDHMSGTNKSANVSTWLHSEINQTGDLWNDLKLFDVGQSKATSHARPYSAVQSTNTH
QVYRERSKTPNISSRNVDEADLNRVVDILSLTDVTENEPTTKVNISSSKNWKTTKENLLT
HDTTLASFDASTVMDLRNLFFGQTKNGFSSEWVNQNFRFCNCSYGEPNELRFGIVQNKGG
PCGVLAAVQAVVLKHMLFIENTVVCPSDLNVTDKQRTKCLVSALAEIIWRSRSVQTTAYL
ALMAQRKQFTLPMLCRTDGVSEYVFLQTCKSFEELKLCIEQNIDIYEKGKGSCILLLFSC
ILSHGIKQVKQDMDEPTGHIMGVHNYCTQEMINLLLVGTATSNAFDNKIKLDADNTLYGV
SLQSDVGMLSLFEHYGSCTIGNNYKVPKYPIWLVCSESHFSVLFSFDKTICEKLIKKVFD
LFYYDGLANQDEVIRLTVNTTATNVCKHDDKDLVPPLDHCIRTKWPNASVDWNDTDPIL
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaataacttagaaagcataactgcatcgttagtgcgggaatatctacacagacacaaa
tgtgttcaatcacttcaacaactcgatgttgagtttccaagagatgaatcaagtatcagt
aacagatctaagctagcttcagcattaaacatggacggtttgatgaaggtaaataaaata
aaaaagcaaccatacaagtctgtacttgaagtaatggtttccaattttgttttaaaaaat
aacacaccagtaatcgtgggcagtgatgttggcttaccacaacagtctgtacaaaatgaa
gacagtgcaaagctaaagacatcacagtcagaaaacacaaataaaaataactatcacgat
acacaacctgtagatcatatgtcaggtaccaacaagagtgctaatgtttctacttggctt
cattctgaaatcaatcaaacaggagatttatggaatgatctaaaactatttgatgtgggt
caatcaaaagcaacctctcatgcacgcccatattctgctgtgcaatctactaacacgcat
caggtataccgggagcgctcaaaaactcccaatataagtagtaggaatgtggatgaagca
gatttaaacagagttgtagatattcttagtttaacagatgtaacagagaatgaaccaaca
acaaaagttaatatttcatcttcaaaaaattggaagacaacaaaagaaaacttactcact
catgacactactcttgcctcttttgatgccagcactgttatggatcttaggaatttattc
tttggtcaaaccaaaaatggttttagcagtgagtgggtaaatcaaaatttcagattttgt
aactgttcttacggtgaaccaaatgaactccgatttggaattgtgcaaaacaaaggtggc
ccttgtggggtattggctgcagttcaagctgttgtactaaaacacatgttgtttattgag
aacacagttgtttgtcctagtgatcttaatgtaacagataaacagagaactaaatgttta
gtttctgcactggctgaaataatatggagaagtaggtctgtacaaacaactgcttattta
gcactgatggctcaaagaaaacaattcacgttaccaatgttgtgtagaactgatggagtg
agtgaatatgtttttttacaaacctgtaagtcttttgaagaattaaagctttgtattgaa
caaaatattgatatttatgagaaaggcaaaggaagttgcattcttctcttgttttcatgt
attttatcgcatggaataaaacaagtcaaacaagatatggatgaacctactggtcacata
atgggtgtacataactattgcacccaagaaatgataaatttattgctggttggcacagca
acatctaatgcttttgataacaagataaagttagatgcagataatacactatatggtgtt
tctctgcaaagtgacgtaggaatgctgtctctttttgaacattatggatcttgtaccatt
ggtaataattataaagtgccaaaatacccaatatggctggtgtgtagtgaaagtcatttt
tctgttttgttctcgtttgataaaacaatttgtgaaaagttaattaaaaaagtttttgat
ttattttattatgatggattagcaaatcaagatgaagtgataaggttaacagtgaacacc
actgctactaatgtatgtaaacatgatgataaggatttagttccaccactggatcattgt
attcgtacaaagtggccgaatgcttcagtggattggaatgacaccgatccaattttgtaa
DBGET
integrated database retrieval system
