Ciona intestinalis (yellow sea squirt): 100182788
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Entry
100182788 CDS
T01056
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00512
Mucin type O-glycan biosynthesis
cin00514
Other types of O-glycan biosynthesis
cin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
100182788
00514 Other types of O-glycan biosynthesis
100182788
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100182788
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
100182788
Glycosyltransferases [BR:
cin01003
]
Glycan extension
Type 3 chain
100182788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
100182788
NCBI-ProteinID:
XP_018669470
LinkDB
All DBs
Position
11:complement(591584..596752)
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AA seq
314 aa
AA seq
DB search
MRRNEFLLFICGLVIGGLIAVTLHKYSDTSLRPVRSPEVSQYNFVSTRTETTTCESTAKN
ISNVRVLCWVMTSPMTLFTKAVHVRDTWGRRCDKILFMSSEDNEKLPAIGLGVKEGREHL
YDKTAAAFQYIWTHHKDEADWFLKADDDTYVIIENLKLLLKDHDPYLPMYFGRKFTPMVK
QGYMSGGAGYVLSKAALSRFDRATRTQRCIPLDSNEDLEIGRCMQHIGVKTMDSRDPEKK
ETFFPFSPALHILPGNIPKDSWYWKYIAHPNPSGPGCCSKHMISFHYVQPDMMHIIHHFI
YRMEAYGVKAQSYV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaaacgagtttctgttatttatctgcggtcttgtaataggagggttgattgcg
gtaactttacataaatacagtgatacaagtttaaggccagttcgatcaccagaagtatca
caatataatttcgtgtcaacaagaacagaaactacaacatgcgaatcgacagcaaaaaac
atcagcaatgttcgtgtcttgtgctgggtgatgacatcaccgatgacgttgtttacgaaa
gctgtgcatgtgagggatacttgggggagaagatgtgataaaatattgttcatgagctcg
gaagataacgagaaattgccagctatcgggttaggcgtaaaggaaggtagggaacatctt
tatgataaaacagcagctgcgtttcagtatatttggacgcatcataaagatgaagcggat
tggttcctcaaagctgatgatgatacttatgttataattgaaaatttaaagttgttgtta
aaggaccacgacccatacttgcccatgtattttggtcgtaagtttacaccaatggttaaa
caaggttacatgagcgggggggctggttatgtattgagtaaagctgcactaagtagattt
gatcgcgcaactcgtacacaaagatgtatcccccttgattctaatgaagatttagaaatt
ggtcgatgtatgcaacacattggggtaaaaaccatggattcgagagatccagagaagaag
gaaaccttttttcctttctctcctgcattgcatatcttaccaggaaacataccaaaagat
agctggtattggaagtacatagctcaccccaacccttctggtcccggatgttgctctaaa
catatgatttcgtttcattacgtacaaccagatatgatgcacataatacatcactttata
taccgtatggaggcgtatggtgtcaaagctcaaagttacgtttaa
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