Ciona intestinalis (yellow sea squirt): 100182798
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Entry
100182798 CDS
T01056
Name
(RefSeq) uncharacterized protein LOC100182798 isoform X2
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cin03000
]
100182798
Transcription factors [BR:
cin03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100182798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBP
zf-C2H2
zf-C2H2_2
DUF7129
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
100182798
NCBI-ProteinID:
XP_009857767
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All DBs
Position
2:882331..896117
Genome browser
AA seq
1927 aa
AA seq
DB search
MERNDSNKLCSNGMNMLLSAIERERQAAEFSFNSAKNTSSFNPHAQNCEQTTEIESKGPD
YSLSSCLNVTNPLNGLNLQAYSSPLMFPFISPASHTQSTLTPPAVPVFGSVEGTNVFDLR
CVACGLQCKTIAELHCHIMKRHLANGLHASPDLKQSDRISAFSAESQATEPTRLSESTDH
VSSSEFPIPTPNFAMLSSFPSLPANGFRPELSSVYPPGSTPAFGVPQSINSIRLPQFPNT
YNVINPYLPYSGLLGINGVFPSVTVPANVNAVMPPGYNPYVGFPSVGSPNLLSTRFPFIP
GAAMNAALDNNIGTSPTMPVHDKNCNDLVNSKMLHRHLDPLSANSRHTDPIKRRLSAPII
SLGKNFKFPHPYNRLAKSTVSSGPSCAALPEHTEQALDPNSYRHASRRSSVSEKQETDDK
GSGNRINAKSIEQHISKLISNNEKVLLNPVLERVKPRRVFRRNSLDPASLSSYAASIAGR
HVSEGSYPNGEENGLNKMYGDVVQQTFAQDGYPSPDVKPPGISTAEYNKMIELTRAPGSG
IRKHSMENYENHFRFSSNDNGPASNRFLGKRNSFSGPTFTDAKKPKRTFFECSDCGVRYR
KEENYMIHKQVYCKYKNRRAGFGEEQSFCSSNKPDISRVPYNRNVLKPHNNSSLVTSSSQ
AHCVVTSSLPPHSIETMSMNQSYADIYRTKIAEAERLHPLYPIQHPDTETTQTGSTDDKE
ISEGNKQPVNTIPTNKLPPNKRHMHLMRHNDDDKKTESEHGCTGKDSPQKLNDISIAGED
EQFPPSPTTMSSERNGQQWRSISEGNTSTNDLFHFAESSVPRSNYKLLLHQISLRNLQDM
GLITKPQTLSVPKEPTAKQWHQAQKNCYVSHLDKLRRSSVDVSPLAQHVRRPSLPVMLPM
YPPNGLAVNRIPELRNDFSWLGSSSLGGQISSDRSSQQHYFPKESTIVPPKHTREETVNI
HKPLTKADSAVDVNNNNNESDRSNSPMEALPLNKSQPPTISPHDLLQEKERAQNVQDRIN
TSDVNSTTTELLVSPSSTIDIVSTETKLDSPHGVRISRLLYPHMHPTLGSEVHSTYCSIT
SPQPTYVEVTKQGDTPLSMYSQWAVSEPILMPPDMTVTDILNCCRRSKEGFRKGVIVTAK
AAEKLIVTDTNKAWKSSSDTKQPAIDDLNCSEADEGSDIFVPKLLIPTTDISACCIYTSC
CYASSTPRRQVETSDSLKPTESDVASNDCADNVDGNNDEPESSYIDVVSICEKSPHITHT
EHDNEPMEKSNDSPRGEDSAKESLPQAIRAVHPSKTCGELSDHVLRRCSLCSIKAGRSDL
VPEATCQICRDFATTCFTKTTTSIPILSTINNSSSTSSYSHSNGYLDKTKALSGSTQHWV
SNTTRENQTVFQYPSPNSRKASLNETNSPHSPTPSTTSLGDGEHETMPGNEDGGSVVSPS
LAEVVSEVIRSAAIQSKLQTTKKHRLPQSRPLHPLTSPHDISHQTNEEYSTNNSNATHRS
TLQHDQVNDSVDTTSGSDATLQHDDEITKSCAKLNWRRLALSSRESQLFLYKANMLQQTN
EHELSNNKGGTEDQDDVTTIVNTNDSTQTFHSDDHKLNESDSIYQDSMVFESDDDQEQIT
SDDVRGSSLARNCDDTARPYKCTECKVAFRTGGHLAKHLRSKGHTVAMQKKTLNRLKMHK
LGTPAPHPGVAHDDVRTPQHADGVLSSTVPVTTSCKASPELLDGTGGLARAQVRALFEGN
DEYACVPHCGSCDDVITTDNADELHNPRPFKCLACRVAFRFQGHLDRHFRSNLHLIAVGH
YDHDKSEIDVLPETDCRLLTSSTPLPSDSLVPSSAAKPLSHEAAKLPHAYNHLTNSSLQK
STSSLYGVTHVPSRRNSSLINPDESNIMKSQSTDSRPSSVHAEYIDGSVLPPNKGSSAGV
YRVTPCN
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaatgattcaaataaactgtgcagtaatgggatgaacatgcttctctccgcc
attgaaagagagcggcaagccgctgaattttctttcaactccgccaaaaacacgtcatcg
tttaatccacatgcacaaaactgtgagcagaccaccgaaatcgaaagcaaaggtcctgat
tatagtctttcttcatgcttaaacgtcacaaacccactgaatggtttgaatctccaggca
tattcatcacctctcatgtttccttttatatcgccagcaagtcatacacaaagcaccctt
actccaccagctgtaccggtgtttggatctgtagaaggaacaaatgtgtttgatctccgt
tgtgttgcctgtggtttacagtgcaagaccatcgctgagttgcattgccacataatgaaa
cggcatttagctaatggattgcatgcctcacctgatctcaaacagtcggaccgtatttct
gcattttctgcagaatctcaggcaacggaaccaactagattaagtgaaagtacagatcat
gtatcatcatcagagttcccaattcccacgccaaactttgctatgttgtcaagtttccct
tccttaccagccaatggatttcgaccagaactaagctccgtttacccgcctggttcaaca
cctgcctttggcgtgcctcagtcaatcaactcaatccgtttaccccaatttccgaataca
tacaacgtgattaacccatatctgccttactcaggattattgggaataaatggcgttttt
ccatcggtaactgtgcccgccaatgttaatgcggtaatgccgcctggatacaacccttac
gttggttttccttcggttggatccccgaacttgctttccacaagatttccttttattccc
ggcgccgcaatgaatgctgctttggacaacaacatcggtacatctccaacaatgccggtt
catgacaagaactgcaacgacctcgttaattctaaaatgcttcatcgtcacttagatcct
ctcagtgcaaactccagacatacggatccgataaagcgtcgcctttcagccccaataatt
agccttggaaaaaacttcaagtttccccacccatacaacagacttgctaaatcaactgta
agcagtggcccttcatgtgccgcgttacccgaacatacagaacaagctttagatccgaac
tcttaccgccatgcatcccgtcgcagttccgtatccgagaaacaagagaccgatgataaa
ggatcaggaaaccgaattaacgcgaagtctatagaacaacacatttcaaaattaatttct
aacaacgaaaaggttttgcttaaccccgttctagagcgtgtgaaaccgcgccgtgtcttt
cgtagaaacagtttagatccagcctcactttcatcctatgcagcgtccatagctggaaga
catgttagtgaaggctcctatcctaatggggaagaaaacggtttaaataagatgtacggt
gatgtggtccaacaaacatttgcacaagacggttatccatcacctgacgttaaaccgcca
ggcatatcaaccgctgaatacaacaagatgattgaactgaccagagcacctggtagtgga
attagaaaacactcgatggaaaactacgagaaccattttcggttcagtagcaatgacaat
gggcctgcttcaaaccgatttcttggtaaaagaaactctttttccggcccaacatttact
gatgctaagaaaccaaaacggacattctttgaatgcagcgattgtggtgttcggtaccga
aaagaagaaaactacatgatccataaacaggtttactgcaagtataagaacaggcgggct
ggttttggagaagagcaatctttctgttcgagcaacaaacctgatatttcccgtgttcct
tataatcgtaatgtattgaaaccacataacaacagttcacttgtaacaagtagtagccaa
gcacactgtgtcgtaacatccagtttaccgccacattcaatcgaaactatgtctatgaac
caatcgtatgctgatatttacagaactaagattgcagaagccgaaagactacatccgtta
tacccaatacaacatccagatacagaaactacccagaccggatcaacagatgacaaagaa
atatcagaaggaaacaaacaacccgtgaatacaattcctacaaacaaactccctcccaat
aaacgtcatatgcatctaatgcgacataatgacgatgataaaaaaacggaatcggaacat
ggttgcaccggaaaagattccccacaaaaacttaatgacataagtattgctggcgaagac
gaacaattcccaccaagtcctaccaccatgtcatctgagcgaaacggtcaacaatggcgc
tccatcagtgaaggtaacacctctactaacgacttatttcatttcgccgaatcgtcggtt
ccccgaagcaattacaaattacttctgcatcaaattagtttacgtaacttgcaagacatg
ggcttaataacgaaaccacagacgctgtcagtaccgaaggaaccaacggcgaaacagtgg
catcaggcgcagaagaattgctacgttagccacctggataaattacgtaggagttcagtt
gatgtgtcacctctcgctcaacacgtgcgaagaccgtcactaccagtcatgctgccaatg
tacccacccaatggtttagctgtaaaccgaattccagagctgcgaaacgatttctcttgg
ctcggttcatcttcactaggagggcaaatttcaagcgatcgatcgtcgcaacaacattat
tttcctaaagaatcgaccattgttccgcccaaacatactcgcgaagagacagtaaatata
cacaagccacttacaaaagcagattctgcagttgacgtcaataacaacaacaatgaaagc
gacaggtccaattctcccatggaagccttaccgctgaacaaaagtcaaccacccacaatt
tcgcctcatgatttacttcaagaaaaagaaagagcgcaaaatgtgcaggatcgtattaac
acaagcgatgtgaacagcacaaccaccgagctgttggtttctccttcgtcaactatagac
attgtttcaactgaaacaaagctcgacagtccgcatggggttcgaatatcccgcctctta
tacccacacatgcacccgacacttggatctgaagtgcattcaacttattgcagcatcacc
agcccccagcccacttatgtagaggtaacaaagcagggtgacacaccgctttcaatgtac
agccaatgggcggtatcggaaccaatcctaatgcctcctgatatgacagtaacggatata
ttaaactgctgcaggcggtcgaaggaaggtttcaggaaaggagttatcgtaaccgcaaaa
gcagcggagaagttaatcgttacagacacaaacaaagcgtggaagtcaagctccgacacc
aagcaacctgctattgacgatctcaattgttctgaagcggacgagggttccgatatattt
gtccccaaactgctcataccgactacggatatttcagcgtgttgtatctatacttcatgt
tgttacgccagcagcactccacgtagacaagttgaaactagcgacagtttaaagccgaca
gaatcagatgttgccagcaatgattgtgctgataatgtcgatggaaataacgatgaaccg
gagtcaagttacattgatgttgtttccatctgcgaaaagtccccacatataacccacact
gagcatgataatgagccgatggagaagtcaaatgattcccctcggggtgaagattccgca
aaagaatcgctccctcaagctataagggctgtgcatccaagcaagacgtgtggggagttg
tcagatcatgtgttacgtcgctgttcattgtgcagcatcaaagctggacgtagcgacctt
gtacctgaagctacttgccagatatgtcgagatttcgcaacaacttgcttcacgaaaact
acaacctcaatccccattctctccactattaataactcaagctcaacgtcgtcgtattcc
cactctaatggttacttagataaaacgaaagcgttatctggtagcacgcaacattgggtt
tccaacacaacacgtgaaaatcaaactgtgtttcaatacccatctccaaactcaagaaaa
gcaagtttgaatgaaaccaattcccctcattcacccaccccatccacaacgtcgctgggt
gatggagaacacgaaacgatgcctgggaacgaagatggcgggtcagtagtcagtccatcg
cttgctgaggttgtgtctgaggtcatacgatccgctgcaatccaatcgaagctgcaaacc
acaaagaaacatcgtctgccgcaaagccgacctctacaccctttaacttccccacacgat
atttcccatcaaacaaacgaagaatattcaacaaacaacagtaatgctacacatcggtcg
actttgcaacacgatcaagttaatgattctgttgatacgacttcaggtagtgacgcaacg
ttacaacatgatgacgaaatcacgaagtcttgcgcgaaactcaactggcgacggctggct
ctttcatcaagggaatctcaattatttctatacaaagcgaacatgttacaacaaacaaac
gagcacgagctttcaaacaataagggagggacagaggaccaagatgacgtcacaaccatt
gttaatacaaatgattcaacacagaccttccactccgatgatcataaactaaatgagagt
gattcaatatatcaagattccatggtatttgaaagcgacgacgatcaagagcaaattact
tcggatgatgttcgtggatcttcactcgctcgaaattgcgacgatacagcgcgcccttac
aaatgtactgaatgtaaagttgcctttcgaacaggtggacatcttgcaaagcatctacgt
tcaaaaggccatactgttgccatgcagaagaaaacgcttaacagactgaagatgcacaaa
cttggtactccagcaccacacccgggagttgcacacgatgatgtgagaacccctcaacat
gctgatggagtcttgtcatcaactgttcctgttacgacaagttgtaaagcttcgccagag
ttgttggatggaactggtggtttagcacgcgcacaagttcgtgcattattcgaaggcaac
gatgaatatgcttgcgttccacactgcggcagttgcgatgacgtaatcacgacggataat
gccgatgaattgcacaatccaagacctttcaaatgccttgcttgccgcgttgcttttcgc
tttcaaggtcaccttgatcgtcatttccggtcaaatctgcaccttattgcggttggtcat
tatgaccatgataaaagcgaaattgatgttttacccgaaactgattgtcgtcttttgacg
tcatcaactcctcttcctagcgactccttagttccatcatccgctgccaaaccattaagc
catgaagcggcaaaattaccacacgcgtacaatcacttaacgaactcatcgcttcaaaaa
tcgacatcatctctgtacggtgtcactcacgttccatcgcggagaaattcaagtttaatc
aatcctgatgaatcaaatataatgaaatctcaatcaacagatagtagaccaagctctgtc
catgcagaatacatcgacggatcggttctcccaccaaacaagggttcaagtgctggtgta
tatcgtgtcacaccatgtaattga
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