Ciona intestinalis (yellow sea squirt): 100182842
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Entry
100182842 CDS
T01056
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial-like
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cin03029
]
100182842
Enzymes [BR:
cin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
100182842
Mitochondrial biogenesis [BR:
cin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
100182842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
100182842
NCBI-ProteinID:
XP_002124660
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MLQVRAGFERNFLKFLRRKNQKIIFHRKLRISPANSGLTAQASNPLLPHNDDSFHSFDGK
EILFEEQYAEATHLEPKKPTIRNKYLQEMSTSSKFLLNYVETCAKGGYLDDAVATVIDKL
DQSAASVDDRVLEFIHREVFRSTNLRYPPGGDAVSPFEINLILFEKMKQTKRKPSAASCA
YILASLQKFQSNAAISGRLLTRFTSTYGYSCLDILDNCRHDMECYNSCELAITSTFPGFK
HSFTPPLEGGSDNPLTQGLGGETPNTSIRLDSVNSKVLKHFYEKQLQQEIIGKGKIPNVL
NKRAKVSKSIQKKRDAVESLHSTWKVELLRSFQQLKVSEEDKWTRYRKHRFSGVYPFLCV
LPPETFVDIIIQFMMSMSASGNIASVLCYELGSSVYSHHLINQLKHDGYFENLRMIYSDY
TSMYTHRCNLSPRQSWLQLEDKIGNISTRHRIEPWHNMWLFTVGLKLLEVMVSTLTFNLD
WGSGVKLRNIPAVFNSYKVWGGKMYGMAVPHPGYVAMLSDAKHDFEFETGILPMVVPPLP
WVNPSQGGYLASPTKFVRSYRDVIGQEEDTIDQSDVTTVMDSLNILGSVGWKINQRVLDV
QLCLFRNNGDKKLSIPPPATSAPKPPDLSNVADLPPNKRGEMFEAARAATKLKLEMNSLH
ADGLYKLSIADYYRDDIVWFPHNLDFRGRTYPVSRHLNYMGSDVSRSLFLFADGKPLGGD
GLNWLKIHLVNLTGEKKKEGMAARLDYANEMMDEILDSADRPLDGRCWWKESDEPWQTLA
ACFVLADALRTRNPEDYVCNLPVYQDGSCNGLQHYAALGRDTLGAQQVNLAPSSVPQDIY
AGVAAKVENIRSLDADRGSEVAKVLEGFVTRQVVKQTVMTTVYGVTRYGGVLQVQRQLLY
LDDFPRQHSLKGAMYLVDALFQSINEIFTGASHIQKWFTDIARCVSRGGNPVEWETPLGL
RVVQPYHSIMTQTMDTQLQRINFTRATTAPNVMKQTNAFPPNFIHSLDSTHMMLTALYCH
KFGIKFSAVHDCYWTHACDVDIMNVICREQFVKLHSQPILEKLASHLKKFLKPAEPHDIT
NTLQEELLLSLLNNVPTKGDFDLNQVKNSVFFFS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagttcgggctggcttcgaacgaaactttttaaaatttcttcgacgaaaaaat
cagaaaattatttttcaccgaaaattaagaatttcccccgcaaattctggattgaccgct
caagcgtcgaatccattattacctcataatgatgatagtttccacagttttgatggaaaa
gaaatattatttgaagaacaatacgccgaagccactcacctggaacccaagaaaccgacg
atccggaacaaatatctccaagaaatgtcaacgtcgtcaaagtttttgttaaattacgtt
gaaacttgtgccaagggcggatatttggacgatgctgttgccacggtgattgataaactc
gaccaatcagctgcttccgttgatgacagggttttagaattcattcatcgagaagttttc
cgttctacgaaccttcgatatccaccaggaggcgatgctgtgtcaccattcgagatcaac
ctcattttattcgagaaaatgaaacaaacgaaacgaaagccctctgctgcctcatgtgct
tatatcctggcttcgttgcaaaagtttcaatcgaacgcggcaatatcgggtagattgttg
acgagatttacctcaacgtacggatattcgtgtttggacattctcgacaattgtcgccac
gacatggaatgttacaactcgtgcgaactcgcgattacatctacgtttcctgggtttaaa
cactcgttcaccccaccacttgaggggggtagtgacaatccattgacccagggactcgga
ggggaaacccccaacacgtcaatacgccttgattctgtgaattcaaaagttttaaaacat
ttttacgaaaaacaattacagcaagaaattatcgggaaagggaaaatccccaatgtttta
aacaagagagcaaaagtttcaaagtcaattcaaaagaaacgcgatgcagttgaatcgtta
cactcaacgtggaaagttgaattacttcgttcgtttcagcaactcaaagtcagcgaggaa
gataaatggacgcgatatcgaaaacatcgattttctggcgtttacccgtttctatgcgtg
ttacccccggaaacatttgttgacatcataatacagtttatgatgtctatgtcggcgagt
gggaacatagcaagtgtgttgtgttacgaactcggatcatcggtttattcacatcatctc
attaatcaactcaaacacgacggatatttcgagaatcttcgtatgatatattctgactat
acctctatgtacacgcatagatgcaatctttccccacgccaatcatggcttcaactcgaa
gacaagattggaaatatatcgacgcgacaccgaatcgaaccctggcacaacatgtggctg
ttcactgttgggttgaaactacttgaggtcatggtgtcaactttaacctttaaccttgac
tgggggtcaggggtcaaactgcggaacatcccagctgtgttcaactcttataaagtatgg
ggtggtaagatgtacgggatggccgtcccacatccagggtatgttgcgatgctcagtgat
gcgaaacatgatttcgagttcgaaacggggattctcccaatggtagttccccctctgccg
tgggtaaacccctcacagggaggttacttagcaagccctacaaagttcgttcgttcgtac
cgcgatgtgattggtcaagaggaagacacgatcgaccaatcagacgtcaccacggtaatg
gactcgttgaatatcctcggttcggtcggatggaaaattaatcaacgcgtgctcgatgtt
caactctgtttgttcaggaataatggcgacaagaaactctcgattcccccgcctgccacc
tctgcccccaaaccccccgatctttcaaacgtggccgacttaccccccaataaacgcgga
gagatgtttgaggcagcgagggcggccactaagttgaaactggagatgaattcacttcac
gccgacggactttataaattatcaatcgctgattattatcgcgacgatattgtttggttt
cctcacaacctcgacttccggggccgaacttaccccgtgtcgcgtcatctcaactacatg
gggtctgatgtttcgcgctcgttgttccttttcgctgatggcaagccactaggaggcgac
ggactcaattggttgaagatccatctcgttaatttgacgggagagaaaaagaaagaaggc
atggctgcgaggctggattatgcgaatgagatgatggacgaaatattggattccgcggat
cgaccactagatggcagatgttggtggaaagaaagcgatgaaccgtggcaaacgctcgct
gcgtgtttcgtgctcgctgatgcattacgaacgaggaatccggaggattacgtttgtaat
ttgccggtgtaccaggatgggtcgtgtaacggattgcaacattatgcggcgttggggagg
gacacactgggtgcgcaacaggtgaatcttgccccctctagtgttccgcaagatatttac
gctggagttgccgcaaaagttgaaaacattcggtcgctagatgctgatagagggtcggag
gtcgcgaaagttttggaaggatttgtaacgaggcaagtcgtgaagcaaaccgtcatgaca
acggtgtatggtgtaacaagatacggaggggtgctgcaagtccaacgtcaacttttgtac
cttgatgatttccctcgtcaacattcactgaaaggcgccatgtatttagttgacgcgttg
tttcaaagtattaacgagatattcaccggggctagccatatacagaaatggttcactgac
atcgcacgatgtgtatcacgtggggggaatcccgttgaatgggaaacccccctgggactt
cgagtcgttcaaccataccatagcattatgacgcaaacaatggacactcagcttcaacga
atcaacttcacccgtgcaacaacggcaccaaatgtgatgaaacaaacgaacgcctttccc
ccaaactttattcactcgctcgattcaacgcatatgatgctaacagctctatactgccac
aagttcggcatcaagttctctgccgtccatgattgttattggactcacgcatgtgatgtc
gatatcatgaacgtgatttgccgtgaacaatttgtgaaattacattcacaaccaatactt
gaaaaacttgcaagtcatcttaaaaagtttcttaaacctgctgagccacatgacatcaca
aacacgttacaagaggaattattactcagcttattaaacaatgttcccacaaaaggggat
ttcgatttaaatcaagttaaaaattcagttttcttttttagttga
DBGET
integrated database retrieval system
